RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 DENND2AQ9ULE3 1009 aa17.26■□□□□ 0.35
CHTOP-206ENST00000495554 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
CHTOP-206ENST00000495554 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
CHTOP-206ENST00000495554 TPM2P07951 284 aa17.25■□□□□ 0.35
CHTOP-206ENST00000495554 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
CHTOP-206ENST00000495554 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
CHTOP-206ENST00000495554 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
CHTOP-206ENST00000495554 ME1P48163 572 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 MAGEB6Q8N7X4 407 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 PATL2C9JE40 543 aaKnown RBP17.24■□□□□ 0.35
CHTOP-206ENST00000495554 TPM3P06753 285 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
CHTOP-206ENST00000495554 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
CHTOP-206ENST00000495554 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
CHTOP-206ENST00000495554 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 BRAPQ7Z569 592 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
CHTOP-206ENST00000495554 CCNL1Q9UK58 526 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-206ENST00000495554 DOCK2Q92608 1830 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-206ENST00000495554 GNPATO15228 680 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 ZNF165P49910 485 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 FAM160A1Q05DH4 1040 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
CHTOP-206ENST00000495554 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 MPNDQ8N594 471 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
CHTOP-206ENST00000495554 GOLGA6L6A8MZA4 724 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 CDKL5O76039 1030 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 ARHGEF1Q92888 912 aaKnown RBP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 ZNF830Q96NB3 372 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 GOLPH3LQ9H4A5 285 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 ADALQ6DHV7 355 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
CHTOP-206ENST00000495554 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 EPB41L4AQ9HCS5 686 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-206ENST00000495554 B4E1Z4 1266 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-206ENST00000495554 MBD4O95243 580 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
CHTOP-206ENST00000495554 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 NAPBQ9H115 298 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 A0A1W2PQ27 194 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 A0A1W2PQ64 194 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 A0A1W2PQD8 194 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 GYG1P46976 350 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
CHTOP-206ENST00000495554 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 LINC00301Q8NCQ3 95 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 KCNG4Q8TDN1 519 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
CHTOP-206ENST00000495554 IQSEC3Q9UPP2 1182 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-206ENST00000495554 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 YEATS4O95619 227 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 GNAT2P19087 354 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 IGDCC4Q8TDY8 1250 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
CHTOP-206ENST00000495554 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
CHTOP-206ENST00000495554 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 GSG1L2A8MUP6 293 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 ZPR1O75312 459 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
CHTOP-206ENST00000495554 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 MRPS27Q92552 414 aaKnown RBP17.2■□□□□ 0.34
CHTOP-206ENST00000495554 CNNM2Q9H8M5 875 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 NEDD4P46934 1319 aa17.2■□□□□ 0.34
CHTOP-206ENST00000495554 STK38Q15208 465 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
CHTOP-206ENST00000495554 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-206ENST00000495554 PRKAB2O43741 272 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 LIFRP42702 1097 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 STX1AQ16623 288 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 SYNE3Q6ZMZ3 975 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-206ENST00000495554 FAM84BQ96KN1 310 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-206ENST00000495554 NACAP1Q9BZK3 213 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
CHTOP-206ENST00000495554 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 ZBTB43O43298 467 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 KCNA4P22459 653 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms