RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 BICC1Q9H694 974 aaKnown RBP22.23■■□□□ 1.15
NUP50-218ENST00000493456 SALL2Q9Y467 1007 aaPredicted RBP22.23■■□□□ 1.15
NUP50-218ENST00000493456 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
NUP50-218ENST00000493456 SRRDQ9UH36 339 aa22.22■■□□□ 1.15
NUP50-218ENST00000493456 PSMC4P43686 418 aa22.21■■□□□ 1.15
NUP50-218ENST00000493456 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.21■■□□□ 1.15
NUP50-218ENST00000493456 SHISA4Q96DD7 197 aa22.21■■□□□ 1.15
NUP50-218ENST00000493456 MRS2Q9HD23 443 aa22.21■■□□□ 1.15
NUP50-218ENST00000493456 SPINK5Q9NQ38 1064 aaPredicted RBP22.21■■□□□ 1.15
NUP50-218ENST00000493456 TRIOBPQ9H2D6 2365 aa22.21■■□□□ 1.15
NUP50-218ENST00000493456 PDHXO00330 501 aa22.2■■□□□ 1.14
NUP50-218ENST00000493456 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
NUP50-218ENST00000493456 BCAMP50895 628 aa22.2■■□□□ 1.14
NUP50-218ENST00000493456 CPA4Q9UI42 421 aa22.2■■□□□ 1.14
NUP50-218ENST00000493456 KCNH4Q9UQ05 1017 aa22.2■■□□□ 1.14
NUP50-218ENST00000493456 ADGRA2Q96PE1 1338 aa22.2■■□□□ 1.14
NUP50-218ENST00000493456 INPP5BP32019 993 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 GRK4P32298 578 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 MTFR1Q15390 333 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 PUM3Q15397 648 aaKnown RBP22.19■■□□□ 1.14
NUP50-218ENST00000493456 MIGA2Q7L4E1 593 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 RAET1EQ8TD07 263 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 TRIM47Q96LD4 638 aa22.19■■□□□ 1.14
NUP50-218ENST00000493456 FMNL1O95466 1100 aaPredicted RBP22.18■■□□□ 1.14
NUP50-218ENST00000493456 OSBPP22059 807 aa22.18■■□□□ 1.14
NUP50-218ENST00000493456 CTGFP29279 349 aa22.18■■□□□ 1.14
NUP50-218ENST00000493456 CHRDL2Q6WN34 429 aa22.18■■□□□ 1.14
NUP50-218ENST00000493456 WDR66Q8TBY9 1149 aa22.18■■□□□ 1.14
NUP50-218ENST00000493456 ZNF112Q9UJU3 913 aa22.18■■□□□ 1.14
NUP50-218ENST00000493456 MYPNQ86TC9 1320 aa22.17■■□□□ 1.14
NUP50-218ENST00000493456 GJA8P48165 433 aa22.17■■□□□ 1.14
NUP50-218ENST00000493456 NOL9Q5SY16 702 aaKnown RBP22.17■■□□□ 1.14
NUP50-218ENST00000493456 DPF3Q92784 378 aa22.17■■□□□ 1.14
NUP50-218ENST00000493456 PARK7Q99497 189 aaKnown RBP22.17■■□□□ 1.14
NUP50-218ENST00000493456 HTATIP2Q9BUP3 242 aa22.17■■□□□ 1.14
NUP50-218ENST00000493456 GJB1P08034 283 aa22.16■■□□□ 1.14
NUP50-218ENST00000493456 FGFR2P21802 821 aa22.16■■□□□ 1.14
NUP50-218ENST00000493456 UBXN2AP68543 259 aa22.15■■□□□ 1.14
NUP50-218ENST00000493456 UBE2Q1Q7Z7E8 422 aa22.15■■□□□ 1.14
NUP50-218ENST00000493456 MYH13Q9UKX3 1938 aa22.15■■□□□ 1.14
NUP50-218ENST00000493456 ECM2O94769 699 aaPredicted RBP22.14■■□□□ 1.13
NUP50-218ENST00000493456 CCL5P13501 91 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 SLC5A1P13866 664 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 MOGSQ13724 837 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 KLHDC4Q8TBB5 520 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 LPIN2Q92539 896 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 RBM27Q9P2N5 1060 aaKnown RBP22.14■■□□□ 1.13
NUP50-218ENST00000493456 DAGLAQ9Y4D2 1042 aa22.14■■□□□ 1.13
NUP50-218ENST00000493456 LAMA3Q16787 3333 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 PTPRCP08575 1304 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
NUP50-218ENST00000493456 FCGRTP55899 365 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 TCP10Q12799 353 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 CDC42EP5Q6NZY7 148 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 SLAIN1Q8ND83 568 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 RNF208Q9H0X6 261 aa22.13■■□□□ 1.13
NUP50-218ENST00000493456 CXCL11O14625 94 aa22.12■■□□□ 1.13
NUP50-218ENST00000493456 BCRP11274 1271 aa22.12■■□□□ 1.13
NUP50-218ENST00000493456 PRKCZQ05513 592 aa22.12■■□□□ 1.13
NUP50-218ENST00000493456 BIN2Q9UBW5 565 aaPredicted RBP22.12■■□□□ 1.13
NUP50-218ENST00000493456 NFIAQ12857 509 aa22.11■■□□□ 1.13
NUP50-218ENST00000493456 NR2E3Q9Y5X4 410 aa22.11■■□□□ 1.13
NUP50-218ENST00000493456 COL6A3P12111 3177 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 EYA2O00167 538 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 CAPN2P17655 700 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 DIXDC1Q155Q3 683 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 GPAT2Q6NUI2 795 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 FAM198AQ9UFP1 575 aa22.1■■□□□ 1.13
NUP50-218ENST00000493456 FASTKD5Q7L8L6 764 aaKnown RBP22.09■■□□□ 1.13
NUP50-218ENST00000493456 MRPL50Q8N5N7 158 aaKnown RBP22.09■■□□□ 1.13
NUP50-218ENST00000493456 U2AF1L4Q8WU68 220 aaKnown RBP22.09■■□□□ 1.13
NUP50-218ENST00000493456 PRO3102Q9H379 93 aa22.09■■□□□ 1.13
NUP50-218ENST00000493456 AK9Q5TCS8 1911 aa22.09■■□□□ 1.13
NUP50-218ENST00000493456 SALL1Q9NSC2 1324 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 A0A0G2JLL6 359 aaPredicted RBP22.08■■□□□ 1.13
NUP50-218ENST00000493456 FARP2O94887 1054 aaPredicted RBP22.08■■□□□ 1.13
NUP50-218ENST00000493456 LDHBP07195 334 aaKnown RBP22.08■■□□□ 1.13
NUP50-218ENST00000493456 CYP2C8P10632 490 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 PRDX5P30044 214 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 PRRT2Q7Z6L0 340 aaPredicted RBP22.08■■□□□ 1.13
NUP50-218ENST00000493456 USP44Q9H0E7 712 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 USP40Q9NVE5 1235 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 GNL3LQ9NVN8 582 aaKnown RBP22.08■■□□□ 1.13
NUP50-218ENST00000493456 MGAMO43451 1857 aa22.08■■□□□ 1.13
NUP50-218ENST00000493456 ATRNL1Q5VV63 1379 aa22.08■■□□□ 1.12
NUP50-218ENST00000493456 A0A0C4DFX4 3053 aa22.08■■□□□ 1.12
NUP50-218ENST00000493456 ANP32CO43423 234 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 RFX5P48382 616 aaPredicted RBP22.07■■□□□ 1.12
NUP50-218ENST00000493456 SCYL3Q8IZE3 742 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 PICK1Q9NRD5 415 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 FBXO3Q9UK99 471 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 SLC45A1Q9Y2W3 748 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 DOCK2Q92608 1830 aa22.07■■□□□ 1.12
NUP50-218ENST00000493456 UNC93B1Q9H1C4 597 aa22.06■■□□□ 1.12
NUP50-218ENST00000493456 GABRQQ9UN88 632 aa22.06■■□□□ 1.12
NUP50-218ENST00000493456 A0A1W2PPC1 479 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 PHF20L1A8MW92 1017 aa22.05■■□□□ 1.12
NUP50-218ENST00000493456 SEMA3EO15041 775 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms