RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
VPS36-205ENST00000492650 GLIS3Q8NEA6 775 aa6.37□□□□□ -1.39
VPS36-205ENST00000492650 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
VPS36-205ENST00000492650 DCTN4Q9UJW0 460 aa6.37□□□□□ -1.39
VPS36-205ENST00000492650 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
VPS36-205ENST00000492650 TAL1P17542 331 aaPredicted RBP6.36□□□□□ -1.39
VPS36-205ENST00000492650 LIG1P18858 919 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 FAAP100Q0VG06 881 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 PI16Q6UXB8 463 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 WDR18Q9BV38 432 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 ACSS3Q9H6R3 686 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
VPS36-205ENST00000492650 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
VPS36-205ENST00000492650 PAX4O43316 350 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 BRD1O95696 1058 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 SLFN14P0C7P3 912 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 MAPK1P28482 360 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 PLCB3Q01970 1234 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 CYP27A1Q02318 531 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 CCDC86Q9H6F5 360 aaKnown RBP6.35□□□□□ -1.39
VPS36-205ENST00000492650 PPP1R9AQ9ULJ8 1098 aa6.35□□□□□ -1.39
VPS36-205ENST00000492650 PNMA6FA0A0J9YX94 578 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS36-205ENST00000492650 MSMPQ1L6U9 139 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 GATA6Q92908 595 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 KCNB2Q92953 911 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
VPS36-205ENST00000492650 PIDD1Q9HB75 910 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 TMEM39AQ9NV64 488 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 CCDC39Q9UFE4 941 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 TIMELESSQ9UNS1 1208 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 GNEQ9Y223 722 aaKnown RBP6.34□□□□□ -1.39
VPS36-205ENST00000492650 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
VPS36-205ENST00000492650 SYNGAP1Q96PV0 1343 aa6.33□□□□□ -1.4
VPS36-205ENST00000492650 DYNC1LI2O43237 492 aaPredicted RBP6.33□□□□□ -1.4
VPS36-205ENST00000492650 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
VPS36-205ENST00000492650 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS36-205ENST00000492650 ZNF765Q7L2R6 523 aa6.33□□□□□ -1.4
VPS36-205ENST00000492650 GSX1Q9H4S2 264 aaPredicted RBP6.33□□□□□ -1.4
VPS36-205ENST00000492650 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
VPS36-205ENST00000492650 ID3Q02535 119 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 BSDC1Q9NW68 430 aaPredicted RBP6.32□□□□□ -1.4
VPS36-205ENST00000492650 CRIM1Q9NZV1 1036 aa6.32□□□□□ -1.4
VPS36-205ENST00000492650 TREHO43280 583 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 ZNF862O60290 1169 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 RNGTTO60942 597 aaKnown RBP6.31□□□□□ -1.4
VPS36-205ENST00000492650 OGFOD3Q6PK18 319 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 ABI1Q8IZP0 508 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 FANCD2OSQ96PS1 177 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
VPS36-205ENST00000492650 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
VPS36-205ENST00000492650 PRNPP04156 253 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 MAPK8P45983 427 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 DSC3Q14574 896 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
VPS36-205ENST00000492650 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 SEZ6L2Q6UXD5 910 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 SULF2Q8IWU5 870 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 CBX8Q9HC52 389 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 ADGRE2Q9UHX3 823 aa6.3□□□□□ -1.4
VPS36-205ENST00000492650 HCLS1P14317 486 aaPredicted RBP6.29□□□□□ -1.4
VPS36-205ENST00000492650 ARNTP27540 789 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 TXKP42681 527 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 KIF4BQ2VIQ3 1234 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 MAP1SQ66K74 1059 aaPredicted RBP6.29□□□□□ -1.4
VPS36-205ENST00000492650 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
VPS36-205ENST00000492650 FLCNQ8NFG4 579 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 SSU72Q9NP77 194 aaKnown RBP6.29□□□□□ -1.4
VPS36-205ENST00000492650 DISC1Q9NRI5 854 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
VPS36-205ENST00000492650 FAM87AP0C7U9 286 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 NME2P22392 152 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 PDZD3Q86UT5 571 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 ZSCAN29Q8IWY8 852 aaPredicted RBP6.28□□□□□ -1.4
VPS36-205ENST00000492650 STK35Q8TDR2 534 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 EMILIN2Q9BXX0 1053 aa6.28□□□□□ -1.4
VPS36-205ENST00000492650 GSTT1P30711 240 aa6.27□□□□□ -1.41
VPS36-205ENST00000492650 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
VPS36-205ENST00000492650 PCOLCE2Q9UKZ9 415 aa6.27□□□□□ -1.41
VPS36-205ENST00000492650 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
VPS36-205ENST00000492650 IVNS1ABPQ9Y6Y0 642 aa6.27□□□□□ -1.41
VPS36-205ENST00000492650 NFXL1Q6ZNB6 911 aa6.26□□□□□ -1.41
VPS36-205ENST00000492650 AGBL5Q8NDL9 886 aa6.26□□□□□ -1.41
VPS36-205ENST00000492650 GOLGA2P5Q9HBQ8 144 aa6.26□□□□□ -1.41
VPS36-205ENST00000492650 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
VPS36-205ENST00000492650 ATP2B2Q01814 1243 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms