RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 MAST3O60307 1309 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 SEMA3EO15041 775 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 MYO1BO43795 1136 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 RBM5P52756 815 aaKnown RBP eCLIP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 TTLL12Q14166 644 aaPredicted RBP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 CDC42EP5Q6NZY7 148 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 WDR66Q8TBY9 1149 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 ZNF296Q8WUU4 475 aaPredicted RBP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 FRAT1Q92837 279 aaPredicted RBP14.71□□□□□ -0.05
SRSF4-204ENST00000489898 XAGE2Q96GT9 111 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.05
SRSF4-204ENST00000489898 PLXNB2O15031 1838 aa14.71□□□□□ -0.06
SRSF4-204ENST00000489898 PDE4DIPQ5VU43 2346 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 ZBTB7BO15156 539 aaPredicted RBP14.7□□□□□ -0.06
SRSF4-204ENST00000489898 TBC1D8O95759 1140 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 GNAI2P04899 355 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 SLURP2P0DP57 97 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 TNFAIP1Q13829 316 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 SH3BP5LQ7L8J4 393 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 MYH8P13535 1937 aa14.7□□□□□ -0.06
SRSF4-204ENST00000489898 PARP14Q460N5 1801 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 MCAMP43121 646 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 RGS19P49795 217 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 RHBDL3P58872 404 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 DGKZQ13574 1117 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 IFNL1Q8IU54 200 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 ANKRD13AQ8IZ07 590 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 BRI3BPQ8WY22 251 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 DDX4Q9NQI0 724 aaKnown RBP14.69□□□□□ -0.06
SRSF4-204ENST00000489898 HMG20BQ9P0W2 317 aa14.69□□□□□ -0.06
SRSF4-204ENST00000489898 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 GPR25O00155 361 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
SRSF4-204ENST00000489898 MOGSQ13724 837 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 SUPT20HL1Q3ZLR7 823 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 ELP3Q9H9T3 547 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 TLR7Q9NYK1 1049 aaKnown RBP14.68□□□□□ -0.06
SRSF4-204ENST00000489898 ZNF112Q9UJU3 913 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 DENND2AQ9ULE3 1009 aa14.68□□□□□ -0.06
SRSF4-204ENST00000489898 ADGRA2Q96PE1 1338 aa14.67□□□□□ -0.06
SRSF4-204ENST00000489898 DOCK3Q8IZD9 2030 aa14.67□□□□□ -0.06
SRSF4-204ENST00000489898 MANSC4A6NHS7 340 aaPredicted RBP14.67□□□□□ -0.06
SRSF4-204ENST00000489898 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
SRSF4-204ENST00000489898 PPP1R12BO60237 982 aaPredicted RBP14.67□□□□□ -0.06
SRSF4-204ENST00000489898 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
SRSF4-204ENST00000489898 SREBF2Q12772 1141 aa14.67□□□□□ -0.06
SRSF4-204ENST00000489898 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
SRSF4-204ENST00000489898 PANK1Q8TE04 598 aa14.67□□□□□ -0.06
SRSF4-204ENST00000489898 NOP58Q9Y2X3 529 aaKnown RBP14.67□□□□□ -0.06
SRSF4-204ENST00000489898 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
SRSF4-204ENST00000489898 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
SRSF4-204ENST00000489898 INPP5BP32019 993 aa14.66□□□□□ -0.06
SRSF4-204ENST00000489898 CTU1Q7Z7A3 348 aaKnown RBP14.66□□□□□ -0.06
SRSF4-204ENST00000489898 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
SRSF4-204ENST00000489898 FAM163AQ96GL9 167 aaPredicted RBP14.66□□□□□ -0.06
SRSF4-204ENST00000489898 IDI2Q9BXS1 227 aa14.66□□□□□ -0.06
SRSF4-204ENST00000489898 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
SRSF4-204ENST00000489898 LDHBP07195 334 aaKnown RBP14.65□□□□□ -0.06
SRSF4-204ENST00000489898 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 MAP3K10Q02779 954 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 CRHR2Q13324 411 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 ADGRA1Q86SQ6 560 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 SIRT2Q8IXJ6 389 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 ZKSCAN4Q969J2 545 aaPredicted RBP14.65□□□□□ -0.06
SRSF4-204ENST00000489898 NSUN4Q96CB9 384 aaKnown RBP14.65□□□□□ -0.06
SRSF4-204ENST00000489898 DBNDD2Q9BQY9 259 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 DBNLQ9UJU6 430 aaKnown RBP14.65□□□□□ -0.06
SRSF4-204ENST00000489898 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 A0A0G2JMZ2 1700 aa14.65□□□□□ -0.06
SRSF4-204ENST00000489898 RLFQ13129 1914 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
SRSF4-204ENST00000489898 RGS3P49796 1198 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 MECOMQ03112 1051 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 SLC10A4Q96EP9 437 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 WRNIP1Q96S55 665 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 HDAC5Q9UQL6 1122 aa14.64□□□□□ -0.07
SRSF4-204ENST00000489898 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 DDTLA6NHG4 134 aaPredicted RBP14.63□□□□□ -0.07
SRSF4-204ENST00000489898 TNNI2P48788 182 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
SRSF4-204ENST00000489898 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
SRSF4-204ENST00000489898 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 SPATA5Q8NB90 893 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 HPS5Q9UPZ3 1129 aa14.63□□□□□ -0.07
SRSF4-204ENST00000489898 KIAA0100Q14667 2235 aaKnown RBP14.63□□□□□ -0.07
SRSF4-204ENST00000489898 FRMPD3Q5JV73 1810 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 IRF6O14896 467 aa14.62□□□□□ -0.07
SRSF4-204ENST00000489898 TCP10Q12799 353 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms