RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 AKAP2Q9Y2D5 859 aa23.95■■□□□ 1.42
CD55-209ENST00000488171 TESPA1A2RU30 521 aaPredicted RBP23.94■■□□□ 1.42
CD55-209ENST00000488171 RGS19P49795 217 aa23.94■■□□□ 1.42
CD55-209ENST00000488171 PIAS4Q8N2W9 510 aaPredicted RBP23.94■■□□□ 1.42
CD55-209ENST00000488171 MS4A4AQ96JQ5 239 aa23.93■■□□□ 1.42
CD55-209ENST00000488171 PTPN18Q99952 460 aa23.93■■□□□ 1.42
CD55-209ENST00000488171 PDS5AQ29RF7 1337 aaKnown RBP23.93■■□□□ 1.42
CD55-209ENST00000488171 FKTNO75072 461 aa23.92■■□□□ 1.42
CD55-209ENST00000488171 CSADQ9Y600 493 aa23.92■■□□□ 1.42
CD55-209ENST00000488171 ZBED9Q6R2W3 1325 aa23.92■■□□□ 1.42
CD55-209ENST00000488171 NFIAQ12857 509 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
CD55-209ENST00000488171 ZGPATQ8N5A5 531 aaKnown RBP23.91■■□□□ 1.42
CD55-209ENST00000488171 FAM151AQ8WW52 585 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 HOOK2Q96ED9 719 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 SNCAIPQ9Y6H5 919 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 PKN2Q16513 984 aaKnown RBP23.91■■□□□ 1.42
CD55-209ENST00000488171 WRNIP1Q96S55 665 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 FAM198AQ9UFP1 575 aa23.91■■□□□ 1.42
CD55-209ENST00000488171 MYH2Q9UKX2 1941 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 SPDYE5A6NIY4 337 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 RLBP1P12271 317 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 TCP10Q12799 353 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 POLA2Q14181 598 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 ZKSCAN4Q969J2 545 aaPredicted RBP23.9■■□□□ 1.42
CD55-209ENST00000488171 OTUD5Q96G74 571 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 NEUROD6Q96NK8 337 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 USP40Q9NVE5 1235 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 GAKO14976 1311 aa23.9■■□□□ 1.42
CD55-209ENST00000488171 G3BP1Q13283 466 aaKnown RBP eCLIP23.89■■□□□ 1.41
CD55-209ENST00000488171 CRHR2Q13324 411 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 DCAF15Q66K64 600 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 OTUD7BQ6GQQ9 843 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 MIGA2Q7L4E1 593 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 BRI3BPQ8WY22 251 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 ABCF2Q9UG63 623 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 HPS5Q9UPZ3 1129 aa23.89■■□□□ 1.41
CD55-209ENST00000488171 GTF2A2P52657 109 aa23.88■■□□□ 1.41
CD55-209ENST00000488171 FTSJ3Q8IY81 847 aaKnown RBP23.88■■□□□ 1.41
CD55-209ENST00000488171 ERO1BQ86YB8 467 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 DZIP1Q86YF9 867 aaKnown RBP23.87■■□□□ 1.41
CD55-209ENST00000488171 ZFPM1Q8IX07 1006 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 SSH3Q8TE77 659 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 ZNF341Q9BYN7 854 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 C1orf115Q9H7X2 142 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 HMG20BQ9P0W2 317 aa23.87■■□□□ 1.41
CD55-209ENST00000488171 RFX7Q2KHR2 1363 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 CCL15-CCL14A0A0B4J2E2 113 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 ZBTB7BO15156 539 aaPredicted RBP23.86■■□□□ 1.41
CD55-209ENST00000488171 ATP8B2P98198 1209 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 MLLT1Q03111 559 aaPredicted RBP23.86■■□□□ 1.41
CD55-209ENST00000488171 CCL15Q16663 113 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 SPTY2D1Q68D10 685 aaPredicted RBP23.86■■□□□ 1.41
CD55-209ENST00000488171 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 ITPRIPQ8IWB1 547 aa23.86■■□□□ 1.41
CD55-209ENST00000488171 FAM163AQ96GL9 167 aaPredicted RBP23.86■■□□□ 1.41
CD55-209ENST00000488171 ARID4AP29374 1257 aaPredicted RBP23.85■■□□□ 1.41
CD55-209ENST00000488171 INPP5BP32019 993 aa23.85■■□□□ 1.41
CD55-209ENST00000488171 ZNF384Q8TF68 577 aa23.85■■□□□ 1.41
CD55-209ENST00000488171 IDI2Q9BXS1 227 aa23.85■■□□□ 1.41
CD55-209ENST00000488171 ZNF112Q9UJU3 913 aa23.85■■□□□ 1.41
CD55-209ENST00000488171 GORABQ5T7V8 394 aa23.84■■□□□ 1.41
CD55-209ENST00000488171 FBXO46Q6PJ61 603 aaPredicted RBP23.84■■□□□ 1.41
CD55-209ENST00000488171 SLF2Q8IX21 1173 aa23.84■■□□□ 1.41
CD55-209ENST00000488171 SPATA5Q8NB90 893 aa23.84■■□□□ 1.41
CD55-209ENST00000488171 AK9Q5TCS8 1911 aa23.84■■□□□ 1.41
CD55-209ENST00000488171 MROH7-TTC4A0A0A0MT08 1334 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 IRF6O14896 467 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 RGS3P49796 1198 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 SOX10P56693 466 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 MECOMQ03112 1051 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 ERICH6Q7L0X2 663 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 FAM43AQ8N2R8 423 aa23.83■■□□□ 1.41
CD55-209ENST00000488171 DOCK2Q92608 1830 aa23.83■■□□□ 1.4
CD55-209ENST00000488171 ATRNL1Q5VV63 1379 aa23.83■■□□□ 1.4
CD55-209ENST00000488171 ENTPD3O75355 529 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 MCAMP43121 646 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 BTDP43251 543 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 PPIL2Q13356 520 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 TBC1D9Q6ZT07 1266 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 GPR108Q9NPR9 543 aa23.82■■□□□ 1.4
CD55-209ENST00000488171 WDHD1O75717 1129 aaPredicted RBP23.81■■□□□ 1.4
CD55-209ENST00000488171 TNNI3KQ59H18 835 aa23.81■■□□□ 1.4
CD55-209ENST00000488171 OTOP1Q7RTM1 612 aa23.81■■□□□ 1.4
CD55-209ENST00000488171 DDX4Q9NQI0 724 aaKnown RBP23.81■■□□□ 1.4
CD55-209ENST00000488171 TRIM17Q9Y577 477 aa23.81■■□□□ 1.4
CD55-209ENST00000488171 FPGT-TNNI3KV9GXZ4 949 aa23.81■■□□□ 1.4
CD55-209ENST00000488171 GPR75-ASB3A0A0A6YYF3 556 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
CD55-209ENST00000488171 CETPP11597 493 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 PPATQ06203 517 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 SNAPC2Q13487 334 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 TAF1CQ15572 869 aaPredicted RBP23.8■■□□□ 1.4
CD55-209ENST00000488171 SH3BP5LQ7L8J4 393 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 CD99L2Q8TCZ2 262 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 ERO1AQ96HE7 468 aa23.8■■□□□ 1.4
CD55-209ENST00000488171 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
CD55-209ENST00000488171 UQCRFS1P1P0C7P4 283 aa23.79■■□□□ 1.4
CD55-209ENST00000488171 RHBDL3P58872 404 aa23.79■■□□□ 1.4
CD55-209ENST00000488171 CAP1Q01518 475 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms