RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, human

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB11FIP3-210	ENST00000487899	CCDC85C	A6NKD9	419 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	SEMA3E	O15041	775 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	RLBP1	P12271	317 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	TNNI2	P48788	182 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	MLLT1	Q03111	559 aa	Predicted RBP	13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	TFCP2	Q12800	502 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	VGLL4	Q14135	290 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ZKSCAN2	Q63HK3	967 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	FAM83A	Q86UY5	434 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	CNKSR2	Q8WXI2	1034 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ELP3	Q9H9T3	547 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ATRNL1	Q5VV63	1379 aa		13.93	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	GNAI2	P04899	355 aa		13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	CTU1	Q7Z7A3	348 aa	Known RBP	13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	IFNL1	Q8IU54	200 aa		13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	OPTN	Q96CV9	577 aa		13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	SLC10A4	Q96EP9	437 aa		13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	DENND2A	Q9ULE3	1009 aa		13.92	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	GAK	O14976	1311 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	GPR25	O00155	361 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	LDHB	P07195	334 aa	Known RBP	13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	TIMM10	P62072	90 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	NFIA	Q12857	509 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	CDC42EP5	Q6NZY7	148 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	XAGE2	Q96GT9	111 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	TMOD2	Q9NZR1	351 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	SNCAIP	Q9Y6H5	919 aa		13.91	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	MYH7	P12883	1935 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	TESPA1	A2RU30	521 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	POLA2	Q14181	598 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	PI16	Q6UXB8	463 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	ZNF384	Q8TF68	577 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	MS4A4A	Q96JQ5	239 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	PTPN18	Q99952	460 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	GNL3L	Q9NVN8	582 aa	Known RBP	13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	FAM198A	Q9UFP1	575 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	NAV1	Q8NEY1	1877 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	MYH1	P12882	1939 aa		13.9	□□□□□ -0.18
RAB11FIP3-210	ENST00000487899	SPDYE5	A6NIY4	337 aa		13.89	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	WRNIP1	Q96S55	665 aa		13.89	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	C1orf115	Q9H7X2	142 aa		13.89	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ALDH1A1	P00352	501 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ARID4A	P29374	1257 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	INHBE	P58166	350 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	CRHR2	Q13324	411 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MVP	Q14764	893 aa	Known RBP	13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	SSH3	Q8TE77	659 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	FAM151A	Q8WW52	585 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	BRI3BP	Q8WY22	251 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	OTUD5	Q96G74	571 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	AKAP2	Q9Y2D5	859 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	CSAD	Q9Y600	493 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MROH7-TTC4	A0A0A0MT08	1334 aa		13.88	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	PDE4DIP	Q5VU43	2346 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	COL2A1	P02458	1487 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MCAM	P43121	646 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MAP3K9	P80192	1104 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	CAP1	Q01518	475 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	TCP10	Q12799	353 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ITPRIP	Q8IWB1	547 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	FTSJ3	Q8IY81	847 aa	Known RBP	13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ZGPAT	Q8N5A5	531 aa	Known RBP	13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	HMG20B	Q9P0W2	317 aa		13.87	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	FKTN	O75072	461 aa		13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	INPP5B	P32019	993 aa		13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	DZIP1	Q86YF9	867 aa	Known RBP	13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ZFPM1	Q8IX07	1006 aa		13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	HPS5	Q9UPZ3	1129 aa		13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MYH8	P13535	1937 aa		13.86	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	CCL15-CCL14	A0A0B4J2E2	113 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ZBTB7B	O15156	539 aa	Predicted RBP	13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	WDHD1	O75717	1129 aa	Predicted RBP	13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	RGS3	P49796	1198 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MECOM	Q03112	1051 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	CCL15	Q16663	113 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	DCAF15	Q66K64	600 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	MIGA2	Q7L4E1	593 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	FAM43A	Q8N2R8	423 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	HOOK2	Q96ED9	719 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	IDI2	Q9BXS1	227 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ZNF341	Q9BYN7	854 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	DDX4	Q9NQI0	724 aa	Known RBP	13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	USP40	Q9NVE5	1235 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ABCF2	Q9UG63	623 aa		13.85	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	IRF6	O14896	467 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	BTD	P43251	543 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	SOX10	P56693	466 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	RHBDL3	P58872	404 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ATP8B2	P98198	1209 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	PPIL2	Q13356	520 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	PKN2	Q16513	984 aa	Known RBP	13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	TNNI3K	Q59H18	835 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	NOL9	Q5SY16	702 aa	Known RBP	13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	SH3BP5L	Q7L8J4	393 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	ERO1B	Q86YB8	467 aa		13.84	□□□□□ -0.19
RAB11FIP3-210	ENST00000487899	SPATA5	Q8NB90	893 aa		13.84	□□□□□ -0.19

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