RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.6■□□□□ 0.73
U2AF1-211ENST00000486519 KCNH4Q9UQ05 1017 aa19.6■□□□□ 0.73
U2AF1-211ENST00000486519 PTPRFP10586 1907 aa19.6■□□□□ 0.73
U2AF1-211ENST00000486519 PI4KAP2A4QPH2 592 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 CASP7P55210 303 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 TRIM32Q13049 653 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 PI4KAP1Q8N8J0 262 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 TTC28Q96AY4 2481 aa19.59■□□□□ 0.73
U2AF1-211ENST00000486519 PFASO15067 1338 aa19.58■□□□□ 0.73
U2AF1-211ENST00000486519 CSF1RP07333 972 aa19.58■□□□□ 0.72
U2AF1-211ENST00000486519 TNNI2P48788 182 aa19.58■□□□□ 0.72
U2AF1-211ENST00000486519 MDM2Q00987 491 aaPredicted RBP19.58■□□□□ 0.72
U2AF1-211ENST00000486519 PXYLP1Q8TE99 480 aa19.58■□□□□ 0.72
U2AF1-211ENST00000486519 AK9Q5TCS8 1911 aa19.58■□□□□ 0.72
U2AF1-211ENST00000486519 PLXNB2O15031 1838 aa19.58■□□□□ 0.72
U2AF1-211ENST00000486519 FAM109BQ6ICB4 259 aaPredicted RBP19.57■□□□□ 0.72
U2AF1-211ENST00000486519 PLA2G12BQ9BX93 195 aa19.57■□□□□ 0.72
U2AF1-211ENST00000486519 IRF5Q13568 498 aa19.56■□□□□ 0.72
U2AF1-211ENST00000486519 C8orf58Q8NAV2 365 aa19.56■□□□□ 0.72
U2AF1-211ENST00000486519 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
U2AF1-211ENST00000486519 MAFAQ8NHW3 353 aaPredicted RBP19.56■□□□□ 0.72
U2AF1-211ENST00000486519 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
U2AF1-211ENST00000486519 CDX2Q99626 313 aaPredicted RBP19.56■□□□□ 0.72
U2AF1-211ENST00000486519 PLIN1O60240 522 aa19.55■□□□□ 0.72
U2AF1-211ENST00000486519 GYG1P46976 350 aa19.55■□□□□ 0.72
U2AF1-211ENST00000486519 KSR2Q6VAB6 950 aa19.55■□□□□ 0.72
U2AF1-211ENST00000486519 C11orf49Q9H6J7 331 aa19.55■□□□□ 0.72
U2AF1-211ENST00000486519 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
U2AF1-211ENST00000486519 TNPO2O14787 897 aaKnown RBP19.54■□□□□ 0.72
U2AF1-211ENST00000486519 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
U2AF1-211ENST00000486519 NBPF3Q9H094 633 aa19.54■□□□□ 0.72
U2AF1-211ENST00000486519 DDX58O95786 925 aaKnown RBP19.53■□□□□ 0.72
U2AF1-211ENST00000486519 ANKLE1Q8NAG6 615 aa19.53■□□□□ 0.72
U2AF1-211ENST00000486519 ZNF594Q96JF6 807 aaPredicted RBP19.53■□□□□ 0.72
U2AF1-211ENST00000486519 ZNF341Q9BYN7 854 aa19.53■□□□□ 0.72
U2AF1-211ENST00000486519 G2E3Q7L622 706 aa19.52■□□□□ 0.72
U2AF1-211ENST00000486519 MYLIPQ8WY64 445 aa19.52■□□□□ 0.72
U2AF1-211ENST00000486519 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
U2AF1-211ENST00000486519 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 GCKRQ14397 625 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 TSPYL6Q8N831 410 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 ZNF112Q9UJU3 913 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 MAST2Q6P0Q8 1798 aa19.51■□□□□ 0.71
U2AF1-211ENST00000486519 DNAH12Q6ZR08 3092 aa19.5■□□□□ 0.71
U2AF1-211ENST00000486519 PLA2G5P39877 138 aa19.5■□□□□ 0.71
U2AF1-211ENST00000486519 LRRC26Q2I0M4 334 aa19.5■□□□□ 0.71
U2AF1-211ENST00000486519 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
U2AF1-211ENST00000486519 FAM84BQ96KN1 310 aaPredicted RBP19.5■□□□□ 0.71
U2AF1-211ENST00000486519 FRMPD3Q5JV73 1810 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 RPAP1Q9BWH6 1393 aaPredicted RBP19.49■□□□□ 0.71
U2AF1-211ENST00000486519 CAPN2P17655 700 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 FOXO4P98177 505 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 ZNF697Q5TEC3 545 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 DCAF15Q66K64 600 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 FAM83AQ86UY5 434 aa19.49■□□□□ 0.71
U2AF1-211ENST00000486519 NEXNQ0ZGT2 675 aa19.48■□□□□ 0.71
U2AF1-211ENST00000486519 TTYH1Q9H313 450 aaPredicted RBP19.48■□□□□ 0.71
U2AF1-211ENST00000486519 SEMA6BQ9H3T3 888 aa19.48■□□□□ 0.71
U2AF1-211ENST00000486519 OGDHLQ9ULD0 1010 aa19.48■□□□□ 0.71
U2AF1-211ENST00000486519 SLURP2P0DP57 97 aa19.47■□□□□ 0.71
U2AF1-211ENST00000486519 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
U2AF1-211ENST00000486519 NOL9Q5SY16 702 aaKnown RBP19.47■□□□□ 0.71
U2AF1-211ENST00000486519 ANKRD13CQ8N6S4 541 aa19.47■□□□□ 0.71
U2AF1-211ENST00000486519 USP38Q8NB14 1042 aa19.47■□□□□ 0.71
U2AF1-211ENST00000486519 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.47■□□□□ 0.71
U2AF1-211ENST00000486519 DOCK2Q92608 1830 aa19.46■□□□□ 0.71
U2AF1-211ENST00000486519 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
U2AF1-211ENST00000486519 COL6A1P12109 1028 aa19.46■□□□□ 0.71
U2AF1-211ENST00000486519 HIBADHP31937 336 aaKnown RBP19.46■□□□□ 0.71
U2AF1-211ENST00000486519 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
U2AF1-211ENST00000486519 GADL1Q6ZQY3 521 aa19.46■□□□□ 0.71
U2AF1-211ENST00000486519 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
U2AF1-211ENST00000486519 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
U2AF1-211ENST00000486519 ZDHHC15Q96MV8 337 aa19.46■□□□□ 0.71
U2AF1-211ENST00000486519 TNFRSF10AO00220 468 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 CXCL11O14625 94 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 HMGCRP04035 888 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 TCP10Q12799 353 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 IFIT5Q13325 482 aaKnown RBP19.45■□□□□ 0.7
U2AF1-211ENST00000486519 CCDC30Q5VVM6 783 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 TEKT1Q969V4 418 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 HMX1Q9NP08 348 aaPredicted RBP19.45■□□□□ 0.7
U2AF1-211ENST00000486519 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
U2AF1-211ENST00000486519 DOCK1Q14185 1865 aa19.44■□□□□ 0.7
U2AF1-211ENST00000486519 CCDC84Q86UT8 332 aaPredicted RBP19.44■□□□□ 0.7
U2AF1-211ENST00000486519 TRIB2Q92519 343 aa19.44■□□□□ 0.7
U2AF1-211ENST00000486519 GJD2Q9UKL4 321 aa19.44■□□□□ 0.7
U2AF1-211ENST00000486519 HDLBPQ00341 1268 aaKnown RBP19.43■□□□□ 0.7
U2AF1-211ENST00000486519 NFIAQ12857 509 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 ZFPM1Q8IX07 1006 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 COA7Q96BR5 231 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 TMOD2Q9NZR1 351 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 ZHX2Q9Y6X8 837 aa19.43■□□□□ 0.7
U2AF1-211ENST00000486519 TMEM265A0A087WTH1 108 aa19.42■□□□□ 0.7
U2AF1-211ENST00000486519 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms