RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
TTC3-219ENST00000485402 SNRKQ9NRH2 765 aa17.24■□□□□ 0.35
TTC3-219ENST00000485402 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
TTC3-219ENST00000485402 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
TTC3-219ENST00000485402 CYP21A2P08686 494 aa17.23■□□□□ 0.35
TTC3-219ENST00000485402 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
TTC3-219ENST00000485402 SLU7O95391 586 aaKnown RBP17.23■□□□□ 0.35
TTC3-219ENST00000485402 ATP5JP18859 108 aa17.23■□□□□ 0.35
TTC3-219ENST00000485402 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
TTC3-219ENST00000485402 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
TTC3-219ENST00000485402 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
TTC3-219ENST00000485402 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
TTC3-219ENST00000485402 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
TTC3-219ENST00000485402 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
TTC3-219ENST00000485402 LRRN4CLQ8ND94 238 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
TTC3-219ENST00000485402 GOLIM4O00461 696 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 IFIT1P09914 478 aaKnown RBP17.22■□□□□ 0.35
TTC3-219ENST00000485402 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
TTC3-219ENST00000485402 NFIXQ14938 502 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 TERF2Q15554 542 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
TTC3-219ENST00000485402 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
TTC3-219ENST00000485402 KRT32Q14532 448 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 RBM43Q6ZSC3 357 aaKnown RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 RREB1Q92766 1687 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 VGLL3A8MV65 326 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 POLR3GO15318 223 aaPredicted RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 CCZ1BP86790 482 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 GABPB1Q06547 395 aaPredicted RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 MRFAP1L1Q96HT8 127 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
TTC3-219ENST00000485402 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 DHX40Q8IX18 779 aaKnown RBP17.21■□□□□ 0.35
TTC3-219ENST00000485402 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 PDE8BO95263 885 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 STK38Q15208 465 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
TTC3-219ENST00000485402 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
TTC3-219ENST00000485402 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 NEMFO60524 1076 aa17.2■□□□□ 0.34
TTC3-219ENST00000485402 CICQ96RK0 1608 aaPredicted RBP17.2■□□□□ 0.34
TTC3-219ENST00000485402 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.345e-8■■■□□ 17.3
TTC3-219ENST00000485402 DPCR1Q3MIW9 517 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 DNAI1Q9UI46 699 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 LY75O60449 1722 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 CTAGE5O15320 804 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 SYCP1Q15431 976 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
TTC3-219ENST00000485402 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
TTC3-219ENST00000485402 ZNF831Q5JPB2 1677 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 CAVIN2O95810 425 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 FAM160A1Q05DH4 1040 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 NYAP1Q6ZVC0 841 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
TTC3-219ENST00000485402 MYH3P11055 1940 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 GYS1P13807 737 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 PI16Q6UXB8 463 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
TTC3-219ENST00000485402 HAUS7Q99871 368 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 GPHNQ9NQX3 736 aaPredicted RBP17.18■□□□□ 0.34
TTC3-219ENST00000485402 TAF1LQ8IZX4 1826 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 ZNF609O15014 1411 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 ADRA2BP18089 450 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 STOX1Q6ZVD7 989 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
TTC3-219ENST00000485402 HAND2P61296 217 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 CELF1Q92879 486 aaKnown RBP17.17■□□□□ 0.34
TTC3-219ENST00000485402 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
TTC3-219ENST00000485402 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
TTC3-219ENST00000485402 PLSCR1O15162 318 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 NRDCO43847 1150 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 CDC25BP30305 580 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 NDUFA8P51970 172 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 SCARF1Q14162 830 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
TTC3-219ENST00000485402 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
TTC3-219ENST00000485402 SARM1Q6SZW1 724 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
TTC3-219ENST00000485402 CHRNDQ07001 517 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms