RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 AKNAD1Q5T1N1 836 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
CLK3-204ENST00000483723 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
CLK3-204ENST00000483723 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.24
CLK3-204ENST00000483723 TDO2P48775 406 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 GSTO1P78417 241 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 FGD1P98174 961 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 GRIK5Q16478 980 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■□□□□ 10.5
CLK3-204ENST00000483723 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
CLK3-204ENST00000483723 JAG2Q9Y219 1238 aa16.58■□□□□ 0.24
CLK3-204ENST00000483723 LDHCP07864 332 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 PTMSP20962 102 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 SCRN1Q12765 414 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 DPP8Q6V1X1 898 aaPredicted RBP16.57■□□□□ 0.24
CLK3-204ENST00000483723 CYB5R4Q7L1T6 521 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 DZIP1Q86YF9 867 aaKnown RBP16.57■□□□□ 0.24
CLK3-204ENST00000483723 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
CLK3-204ENST00000483723 MTA3Q9BTC8 594 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 CNNM2Q9H8M5 875 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 ATP8A2Q9NTI2 1148 aa16.57■□□□□ 0.24
CLK3-204ENST00000483723 NEDD4P46934 1319 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 STX6O43752 255 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 FGRP09769 529 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 PPARAQ07869 468 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 KRT23Q9C075 422 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 MYH2Q9UKX2 1941 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 B4E1Z4 1266 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 STK3Q13188 491 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
CLK3-204ENST00000483723 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
CLK3-204ENST00000483723 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLK3-204ENST00000483723 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
CLK3-204ENST00000483723 CHRNA5P30532 468 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 EYA3Q99504 573 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 RNF41Q9H4P4 317 aaPredicted RBP16.55■□□□□ 0.24
CLK3-204ENST00000483723 DCP1AQ9NPI6 582 aaPredicted RBP16.55■□□□□ 0.24
CLK3-204ENST00000483723 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
CLK3-204ENST00000483723 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
CLK3-204ENST00000483723 SH2B2O14492 632 aaPredicted RBP16.54■□□□□ 0.24
CLK3-204ENST00000483723 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
CLK3-204ENST00000483723 PDCP20941 246 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
CLK3-204ENST00000483723 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 MROH7-TTC4A0A0A0MT08 1334 aa16.54■□□□□ 0.24
CLK3-204ENST00000483723 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 LIFRP42702 1097 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
CLK3-204ENST00000483723 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 GPR75-ASB3A0A0A6YYF3 556 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 GOLGA6L22H0YM25 854 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 TRAK2O60296 914 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 BAG3O95817 575 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 MFSD14BQ5SR56 506 aa16.53■□□□□ 0.24
CLK3-204ENST00000483723 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
CLK3-204ENST00000483723 KIF13BQ9NQT8 1826 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 GAKO14976 1311 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 USP17L21D6R901 530 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 KDM4AO75164 1064 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 GTF2IP78347 998 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 SLF2Q8IX21 1173 aa16.52■□□□□ 0.24
CLK3-204ENST00000483723 LAMB1P07942 1786 aa16.52■□□□□ 0.23
CLK3-204ENST00000483723 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 JAK2O60674 1132 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 DTNBO60941 627 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 F13A1P00488 732 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms