RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 CFAP100Q494V2 611 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 ZBED3Q96IU2 234 aaPredicted RBP24.87■■□□□ 1.57
RXRB-204ENST00000483281 IL25Q9H293 177 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 CCDC171Q6TFL3 1326 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 BTDP43251 543 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 MIGA1Q8NAN2 632 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 BACH2Q9BYV9 841 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 MYOZ2Q9NPC6 264 aa24.87■■□□□ 1.57
RXRB-204ENST00000483281 AATFQ9NY61 560 aaKnown RBP eCLIP24.87■■□□□ 1.57
RXRB-204ENST00000483281 EPB41L2O43491 1005 aaKnown RBP24.86■■□□□ 1.57
RXRB-204ENST00000483281 MBD4O95243 580 aa24.86■■□□□ 1.57
RXRB-204ENST00000483281 GNAT2P19087 354 aa24.86■■□□□ 1.57
RXRB-204ENST00000483281 ZNF589Q86UQ0 364 aaPredicted RBP24.86■■□□□ 1.57
RXRB-204ENST00000483281 MICALL2Q8IY33 904 aa24.86■■□□□ 1.57
RXRB-204ENST00000483281 DYNLL1P63167 89 aaKnown RBP24.85■■□□□ 1.57
RXRB-204ENST00000483281 DLGAP5Q15398 846 aa24.85■■□□□ 1.57
RXRB-204ENST00000483281 RPAP1Q9BWH6 1393 aaPredicted RBP24.85■■□□□ 1.57
RXRB-204ENST00000483281 RBM5P52756 815 aaKnown RBP eCLIP24.85■■□□□ 1.57
RXRB-204ENST00000483281 ARMT1Q9H993 441 aa24.85■■□□□ 1.57
RXRB-204ENST00000483281 SPDYE2BA6NHP3 402 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 REC8O95072 547 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 SPDYE6P0CI01 402 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 RHBDL3P58872 404 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 LCORLQ8N3X6 602 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 PRMT6Q96LA8 375 aaPredicted RBP24.84■■□□□ 1.57
RXRB-204ENST00000483281 SCN4AP35499 1836 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 ADAMTSL1Q8N6G6 1762 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 CCDC129Q6ZRS4 1044 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 KIAA1211Q6ZU35 1233 aa24.84■■□□□ 1.57
RXRB-204ENST00000483281 PATL2C9JE40 543 aaKnown RBP24.83■■□□□ 1.57
RXRB-204ENST00000483281 LMOD1P29536 600 aaPredicted RBP24.83■■□□□ 1.57
RXRB-204ENST00000483281 CRNKL1Q9BZJ0 848 aaKnown RBP24.83■■□□□ 1.57
RXRB-204ENST00000483281 ECM29Q5VYK3 1845 aa24.83■■□□□ 1.57
RXRB-204ENST00000483281 WDR90Q96KV7 1748 aa24.83■■□□□ 1.56
RXRB-204ENST00000483281 CDC42EP5Q6NZY7 148 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 DSCC1Q9BVC3 393 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 CDK5RAP2Q96SN8 1893 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 SHTN1A0MZ66 631 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 HSPD1P10809 573 aaKnown RBP24.82■■□□□ 1.56
RXRB-204ENST00000483281 EPS15P42566 896 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 LSG1Q9H089 658 aaKnown RBP24.82■■□□□ 1.56
RXRB-204ENST00000483281 USP40Q9NVE5 1235 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 PCDHAC2Q9Y5I4 1007 aa24.82■■□□□ 1.56
RXRB-204ENST00000483281 GIMAP6Q6P9H5 292 aa24.81■■□□□ 1.56
RXRB-204ENST00000483281 SH3RF3Q8TEJ3 882 aaPredicted RBP24.81■■□□□ 1.56
RXRB-204ENST00000483281 MAP4K1Q92918 833 aa24.81■■□□□ 1.56
RXRB-204ENST00000483281 ADARB2Q9NS39 739 aaKnown RBP24.81■■□□□ 1.56
RXRB-204ENST00000483281 ATP8A2Q9NTI2 1148 aa24.81■■□□□ 1.56
RXRB-204ENST00000483281 WNT10BO00744 389 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
RXRB-204ENST00000483281 SEC24BO95487 1268 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 ALX1Q15699 326 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 SLC4A4Q9Y6R1 1079 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 FOCADQ5VW36 1801 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 GSG1L2A8MUP6 293 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 HACL1Q9UJ83 578 aa24.8■■□□□ 1.56
RXRB-204ENST00000483281 SAMD7Q7Z3H4 446 aa24.79■■□□□ 1.56
RXRB-204ENST00000483281 IDI2Q9BXS1 227 aa24.79■■□□□ 1.56
RXRB-204ENST00000483281 ANO2Q9NQ90 1003 aa24.79■■□□□ 1.56
RXRB-204ENST00000483281 IQCA1LA6NCM1 817 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 FOXP2O15409 715 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 MYO1BO43795 1136 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 KIF4BQ2VIQ3 1234 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 VPS53Q5VIR6 699 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 FKBP1CQ5VVH2 108 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 TEX11Q8IYF3 940 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 USP26Q9BXU7 913 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 TDRD3Q9H7E2 651 aaKnown RBP24.78■■□□□ 1.56
RXRB-204ENST00000483281 PRKAB2O43741 272 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 PTH1RQ03431 593 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 SPDYE2Q495Y8 402 aa24.78■■□□□ 1.56
RXRB-204ENST00000483281 MKRN1Q9UHC7 482 aaKnown RBP24.78■■□□□ 1.56
RXRB-204ENST00000483281 ZMYM6O95789 1325 aa24.77■■□□□ 1.56
RXRB-204ENST00000483281 POTECB2RU33 542 aa24.77■■□□□ 1.56
RXRB-204ENST00000483281 EGFRP00533 1210 aa24.77■■□□□ 1.56
RXRB-204ENST00000483281 PRKCSHP14314 528 aaPredicted RBP24.77■■□□□ 1.56
RXRB-204ENST00000483281 NBPF9Q3BBW0 867 aa24.77■■□□□ 1.56
RXRB-204ENST00000483281 TBC1D10BQ4KMP7 808 aaPredicted RBP24.77■■□□□ 1.56
RXRB-204ENST00000483281 IFNL3Q8IZI9 196 aa24.77■■□□□ 1.56
RXRB-204ENST00000483281 ZNF70Q9UC06 446 aaPredicted RBP24.77■■□□□ 1.56
RXRB-204ENST00000483281 WDHD1O75717 1129 aaPredicted RBP24.76■■□□□ 1.55
RXRB-204ENST00000483281 RBM26Q5T8P6 1007 aaKnown RBP24.76■■□□□ 1.55
RXRB-204ENST00000483281 USP50Q70EL3 339 aaPredicted RBP24.76■■□□□ 1.55
RXRB-204ENST00000483281 NACAP1Q9BZK3 213 aa24.76■■□□□ 1.55
RXRB-204ENST00000483281 DCP1AQ9NPI6 582 aaPredicted RBP24.76■■□□□ 1.55
RXRB-204ENST00000483281 USP5P45974 858 aa24.75■■□□□ 1.55
RXRB-204ENST00000483281 TGFBRAP1Q8WUH2 860 aa24.75■■□□□ 1.55
RXRB-204ENST00000483281 SDR42E1Q8WUS8 393 aa24.75■■□□□ 1.55
RXRB-204ENST00000483281 U3KPZ7 1027 aaPredicted RBP24.75■■□□□ 1.55
RXRB-204ENST00000483281 FGAP02671 866 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 APPP05067 770 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 HIRAP54198 1017 aaPredicted RBP24.74■■□□□ 1.55
RXRB-204ENST00000483281 TMOD2Q9NZR1 351 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 CTNNA3Q9UI47 895 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 EPHX2P34913 555 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 TRPM4Q8TD43 1214 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 DDRGK1Q96HY6 314 aa24.74■■□□□ 1.55
RXRB-204ENST00000483281 ENTPD3O75355 529 aa24.73■■□□□ 1.55
RXRB-204ENST00000483281 EPB41L4AQ9HCS5 686 aaPredicted RBP24.73■■□□□ 1.55
RXRB-204ENST00000483281 NECTIN1Q15223 517 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms