RNA–Protein interactions for RNA: ENST00000481273.5

PTK7-213, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTK7, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-213ENST00000481273 ZMYND10O75800 440 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 FAM89AQ96GI7 184 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
PTK7-213ENST00000481273 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
PTK7-213ENST00000481273 TADA3O75528 432 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 GRIN1Q05586 938 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 NCAPHQ15003 741 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTK7-213ENST00000481273 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.41
PTK7-213ENST00000481273 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 CAPZA3Q96KX2 299 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 SRRTQ9BXP5 876 aaKnown RBP12.52□□□□□ -0.41
PTK7-213ENST00000481273 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.41
PTK7-213ENST00000481273 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
PTK7-213ENST00000481273 SCARF1Q14162 830 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
PTK7-213ENST00000481273 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
PTK7-213ENST00000481273 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
PTK7-213ENST00000481273 FANCGO15287 622 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 GPAA1O43292 621 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 CHMP4BP1P59074 171 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 SLC4A8Q2Y0W8 1093 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 L2HGDHQ9H9P8 463 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 ADAM21Q9UKJ8 722 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
PTK7-213ENST00000481273 EFCAB8A8MWE9 144 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 KIF5CO60282 957 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 PDIA6Q15084 440 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 CDC5LQ99459 802 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 ARHGAP6O43182 974 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 EXOSC10Q01780 885 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 ZNF274Q96GC6 653 aaPredicted RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 CNNM1Q9NRU3 951 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 SNAP23O00161 211 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 TEX33O43247 280 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 CMA1P23946 247 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 MRPS25P82663 173 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 TSGA10IPQ3SY00 556 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 METTL24Q5JXM2 366 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 REXO1L1PQ8IX06 675 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
PTK7-213ENST00000481273 CWC15Q9P013 229 aaKnown RBP12.5□□□□□ -0.41
PTK7-213ENST00000481273 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 YEATS4O95619 227 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 DNA2P51530 1060 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 NR5A1Q13285 461 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 AXDND1Q5T1B0 1012 aaPredicted RBP12.49□□□□□ -0.41
PTK7-213ENST00000481273 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 VPS16Q9H269 839 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 ENC1O14682 589 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 ZBTB43O43298 467 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTK7-213ENST00000481273 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
PTK7-213ENST00000481273 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 ACRBPQ8NEB7 543 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
PTK7-213ENST00000481273 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
PTK7-213ENST00000481273 RASSF4Q9H2L5 321 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
PTK7-213ENST00000481273 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 A0A1W2PQ27 194 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 A0A1W2PQ64 194 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 A0A1W2PQD8 194 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 CCDC175P0C221 793 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 CDC25AP30304 524 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 IGSF22Q8N9C0 903 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 SLC12A7Q9Y666 1083 aa12.49□□□□□ -0.41
PTK7-213ENST00000481273 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
PTK7-213ENST00000481273 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms