RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
PTCD3-213ENST00000480102 HOXA10P31260 410 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-213ENST00000480102 GMPRP36959 345 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 CCDC184Q52MB2 194 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 CCDC30Q5VVM6 783 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 KIF6Q6ZMV9 814 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 PRICKLE2Q7Z3G6 844 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 CCDC146Q8IYE0 955 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 ADAMTS19Q8TE59 1207 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 CNKSR1Q969H4 720 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 ESYT1Q9BSJ8 1104 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 THUMPD2Q9BTF0 503 aaKnown RBP6.31□□□□□ -1.4
PTCD3-213ENST00000480102 MYH16Q9H6N6 1097 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 PIM2Q9P1W9 311 aa6.31□□□□□ -1.4
PTCD3-213ENST00000480102 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
PTCD3-213ENST00000480102 LTBP3Q9NS15 1303 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 A6NJR5 290 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 ST5P78524 1137 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 DUSP27Q5VZP5 1158 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 TBC1D9BQ66K14 1250 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 MSL1Q68DK7 614 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 STYK1Q6J9G0 422 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 PRR5LQ6MZQ0 368 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 GRIP2Q9C0E4 1043 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 MIS18AQ9NYP9 233 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 KDM3BQ7LBC6 1761 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 C4AP0C0L4 1744 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 ADCY9O60503 1353 aa6.3□□□□□ -1.4
PTCD3-213ENST00000480102 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 E9PSI1 815 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 H0YIN7 160 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 DDX58O95786 925 aaKnown RBP6.29□□□□□ -1.4
PTCD3-213ENST00000480102 SRGNP10124 158 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 SKIP12755 728 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 ITGA6P23229 1130 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 ALDH1B1P30837 517 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
PTCD3-213ENST00000480102 TMC4Q7Z404 712 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 PPP1R42Q7Z4L9 355 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
PTCD3-213ENST00000480102 TTLL6Q8N841 843 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 MASTLQ96GX5 879 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 ISCA1Q9BUE6 129 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 VPS33BQ9H267 617 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 RRP7AQ9Y3A4 280 aaKnown RBP6.29□□□□□ -1.4
PTCD3-213ENST00000480102 SCN7AQ01118 1682 aa6.29□□□□□ -1.4
PTCD3-213ENST00000480102 MYH14Q7Z406 1995 aaKnown RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 LZTS3O60299 673 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 STAU1O95793 577 aaKnown RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 NPR1P16066 1061 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 DPEP1P16444 411 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 RHOQP17081 205 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 INSM1Q01101 510 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 GPR162Q16538 588 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 EML3Q32P44 896 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 COPS6Q7L5N1 327 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 NBPF5PQ86XG9 351 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 CCDC191Q8NCU4 936 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 C7orf43Q8WVR3 580 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 NANOS1Q8WY41 292 aaKnown RBP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 XAGE2Q96GT9 111 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 UCN2Q96RP3 112 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 CRAMP1Q96RY5 1269 aa6.28□□□□□ -1.4
PTCD3-213ENST00000480102 NIP7Q9Y221 180 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCD3-213ENST00000480102 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 USP17L5A8MUK1 530 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 NTSR2O95665 410 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 SCNN1DP51172 638 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 CENPCQ03188 943 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 NCOA4Q13772 614 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
PTCD3-213ENST00000480102 TWISTNBQ3B726 338 aaPredicted RBP6.27□□□□□ -1.41
PTCD3-213ENST00000480102 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 SMIM5Q71RC9 77 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 NLRP10Q86W26 655 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 C8orf58Q8NAV2 365 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 CHPF2Q9P2E5 772 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 TUBGCP6Q96RT7 1819 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 KIF13BQ9NQT8 1826 aa6.27□□□□□ -1.41
PTCD3-213ENST00000480102 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 VAMP4O75379 141 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 BBOX1O75936 387 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 INHAP05111 366 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 EIF2S2P20042 333 aaKnown RBP6.26□□□□□ -1.41
PTCD3-213ENST00000480102 GDF10P55107 478 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 POU4F2Q12837 409 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 HLFQ16534 295 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 PROSER3Q2NL68 480 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 ALDH1L2Q3SY69 923 aa6.26□□□□□ -1.41
PTCD3-213ENST00000480102 WDR44Q5JSH3 913 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms