RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PWP1Q13610 501 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 RELL1Q8IUW5 271 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 TMPRSS13Q9BYE2 586 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CEP41Q9BYV8 373 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CCDC86Q9H6F5 360 aaKnown RBP6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GGT7Q9UJ14 662 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 GATA4P43694 442 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 FANCCQ00597 558 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 ANKRD34AQ69YU3 496 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 RNF34Q969K3 372 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SUGCTQ9HAC7 445 aa6.54□□□□□ -1.36
SMARCA1-204ENST00000478420 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 AOC2O75106 756 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 TRIM37O94972 964 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 SLFN14P0C7P3 912 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 LIG1P18858 919 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 GBP2P32456 591 aaPredicted RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 RASIP1Q5U651 963 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 Q6ZS46 218 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
SMARCA1-204ENST00000478420 F6X3S4 739 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 PHC3Q8NDX5 983 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 TMEM74Q96NL1 305 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
SMARCA1-204ENST00000478420 SYNGAP1Q96PV0 1343 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MINDY4BA8MYZ0 360 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 ZNF862O60290 1169 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 KIF4BQ2VIQ3 1234 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 MEGF10Q96KG7 1140 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 COPRSQ9NQ92 184 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 CACNA2D2Q9NY47 1150 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
SMARCA1-204ENST00000478420 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TIAF1O95411 115 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 ITGB2P05107 769 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 ADH5P11766 374 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 DRD2P14416 443 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TCF3P15923 654 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PREPP48147 710 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 SOX4Q06945 474 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 CAMK2GQ13555 558 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 UBL7Q96S82 380 aaPredicted RBP6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHA4Q9UN74 947 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 AP4E1Q9UPM8 1137 aa6.5□□□□□ -1.37
SMARCA1-204ENST00000478420 PF4P02776 101 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 ID3Q02535 119 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 LMNB2Q03252 620 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 SEPT6Q14141 434 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 UVSSAQ2YD98 709 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 USP48Q86UV5 1035 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 FAM46AQ96IP4 442 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 RHOVQ96L33 236 aa6.49□□□□□ -1.37
SMARCA1-204ENST00000478420 MSTNO14793 375 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 CCDC84Q86UT8 332 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 METTL16Q86W50 562 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 UTP4Q969X6 686 aaKnown RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PPP1R9AQ9ULJ8 1098 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
SMARCA1-204ENST00000478420 TMPRSS2O15393 492 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 IGHA1P01876 353 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 USP11P51784 963 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 ZNF394Q53GI3 561 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 GOLM1Q8NBJ4 401 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms