RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ERCC4Q92889 916 aaPredicted RBP15.68■□□□□ 0.1
HDAC7-221ENST00000477203 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 BTAF1O14981 1849 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 IFIT3O14879 490 aaKnown RBP15.68■□□□□ 0.1
HDAC7-221ENST00000477203 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
HDAC7-221ENST00000477203 NUP133Q8WUM0 1156 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 ZSWIM5Q9P217 1185 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 PRDX5P30044 214 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
HDAC7-221ENST00000477203 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
HDAC7-221ENST00000477203 AATFQ9NY61 560 aaKnown RBP eCLIP15.68■□□□□ 0.14e-7■□□□□ 10
HDAC7-221ENST00000477203 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
HDAC7-221ENST00000477203 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-221ENST00000477203 PIBF1Q8WXW3 757 aa15.67■□□□□ 0.1
HDAC7-221ENST00000477203 ALDH8A1Q9H2A2 487 aaPredicted RBP15.67■□□□□ 0.1
HDAC7-221ENST00000477203 GNL3LQ9NVN8 582 aaKnown RBP15.67■□□□□ 0.1
HDAC7-221ENST00000477203 HPS5Q9UPZ3 1129 aa15.67■□□□□ 0.1
HDAC7-221ENST00000477203 PATL2C9JE40 543 aaKnown RBP15.67■□□□□ 0.1
HDAC7-221ENST00000477203 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
HDAC7-221ENST00000477203 CNBD1Q8NA66 436 aa15.67■□□□□ 0.1
HDAC7-221ENST00000477203 hCG_1642624A0A1W2PR95 340 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 RESTQ13127 1097 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 NAA16Q6N069 864 aaPredicted RBP15.66■□□□□ 0.1
HDAC7-221ENST00000477203 MFSD6Q6ZSS7 791 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 NYXQ9GZU5 481 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 TRPC5Q9UL62 973 aaPredicted RBP15.66■□□□□ 0.1
HDAC7-221ENST00000477203 CDC27P30260 824 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.11e-7■□□□□ 9.5
HDAC7-221ENST00000477203 C8orf76Q96K31 380 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 USP28Q96RU2 1077 aa15.66■□□□□ 0.1
HDAC7-221ENST00000477203 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
HDAC7-221ENST00000477203 SPATA31A6Q5VVP1 1343 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 CARMIL3Q8ND23 1372 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 VGLL3A8MV65 326 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-221ENST00000477203 ZSCAN30Q86W11 494 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 SMARCC2Q8TAQ2 1214 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 PGBD1Q96JS3 809 aa15.65■□□□□ 0.1
HDAC7-221ENST00000477203 ZNF512BQ96KM6 892 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-221ENST00000477203 RANBP6O60518 1105 aaKnown RBP15.65■□□□□ 0.1
HDAC7-221ENST00000477203 HIBADHP31937 336 aaKnown RBP15.65■□□□□ 0.1
HDAC7-221ENST00000477203 ZNF274Q96GC6 653 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-221ENST00000477203 NR1I2O75469 434 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 OFD1O75665 1012 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 ZNF384Q8TF68 577 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 ME1P48163 572 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 USP25Q9UHP3 1055 aa15.64■□□□□ 0.09
HDAC7-221ENST00000477203 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
HDAC7-221ENST00000477203 BAZ2AQ9UIF9 1905 aaKnown RBP15.64■□□□□ 0.09
HDAC7-221ENST00000477203 PDIA4P13667 645 aaKnown RBP15.63■□□□□ 0.09
HDAC7-221ENST00000477203 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 HMGN5P82970 282 aaKnown RBP15.63■□□□□ 0.09
HDAC7-221ENST00000477203 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 AKNAD1Q5T1N1 836 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 ZNF804BA4D1E1 1349 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 ZBTB43O43298 467 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 CYP2D6P10635 497 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
HDAC7-221ENST00000477203 DIXDC1Q155Q3 683 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 APOA5Q6Q788 366 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 SLC26A6Q9BXS9 759 aa15.63■□□□□ 0.09
HDAC7-221ENST00000477203 CCDC69A6NI79 296 aa15.62■□□□□ 0.09
HDAC7-221ENST00000477203 MECOMQ03112 1051 aa15.62■□□□□ 0.09
HDAC7-221ENST00000477203 GRIK5Q16478 980 aa15.62■□□□□ 0.09
HDAC7-221ENST00000477203 RC3H1Q5TC82 1133 aaKnown RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
HDAC7-221ENST00000477203 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 SLC12A7Q9Y666 1083 aa15.62■□□□□ 0.09
HDAC7-221ENST00000477203 SH2B2O14492 632 aaPredicted RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 SCAND2PQ9GZW5 306 aaPredicted RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 COL5A3P25940 1745 aaPredicted RBP15.62■□□□□ 0.09
HDAC7-221ENST00000477203 FAM47AQ5JRC9 791 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 PRR5LQ6MZQ0 368 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 TSC1Q92574 1164 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 USP17L21D6R901 530 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 NMT2O60551 498 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 IGSF3O75054 1194 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 PTMAP06454 111 aaKnown RBP15.61■□□□□ 0.09
HDAC7-221ENST00000477203 TM4SF1P30408 202 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 PPARAQ07869 468 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 SF3A1Q15459 793 aaKnown RBP15.61■□□□□ 0.09
HDAC7-221ENST00000477203 KRT27Q7Z3Y8 459 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-221ENST00000477203 LLPHQ9BRT6 129 aaKnown RBP15.61■□□□□ 0.09
HDAC7-221ENST00000477203 ALG1Q9BT22 464 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 NUP62CLQ9H1M0 184 aa15.61■□□□□ 0.09
HDAC7-221ENST00000477203 TNMDQ9H2S6 317 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms