RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
LSM2-212ENST00000477182 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
LSM2-212ENST00000477182 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
LSM2-212ENST00000477182 BMP8BP34820 402 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 IGHMBP2P38935 993 aaKnown RBP14.33□□□□□ -0.12
LSM2-212ENST00000477182 MAP3K9P80192 1104 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 AAMPQ13685 434 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 VGLL4Q14135 290 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 EPHA10Q5JZY3 1008 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 U2AF1L4Q8WU68 220 aaKnown RBP14.33□□□□□ -0.12
LSM2-212ENST00000477182 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
LSM2-212ENST00000477182 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
LSM2-212ENST00000477182 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
LSM2-212ENST00000477182 PSMC4P43686 418 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 KCNJ4P48050 445 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
LSM2-212ENST00000477182 FOXO4P98177 505 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
LSM2-212ENST00000477182 FMNL1O95466 1100 aaPredicted RBP14.31□□□□□ -0.12
LSM2-212ENST00000477182 SGPL1O95470 568 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.12
LSM2-212ENST00000477182 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
LSM2-212ENST00000477182 CERS5Q8N5B7 392 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 GREM2Q9H772 168 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 PCDHAC2Q9Y5I4 1007 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
LSM2-212ENST00000477182 SPDYE5A6NIY4 337 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
LSM2-212ENST00000477182 OSBPP22059 807 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 LMBR1LQ6UX01 489 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.122e-9■■■■□ 21.6
LSM2-212ENST00000477182 GDF15Q99988 308 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
LSM2-212ENST00000477182 KLRK1P26718 216 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 TNNI2P48788 182 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 RABL6Q3YEC7 729 aaPredicted RBP14.29□□□□□ -0.12
LSM2-212ENST00000477182 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 Q7L0L9 218 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 ERO1BQ86YB8 467 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 MPHOSPH8Q99549 860 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
LSM2-212ENST00000477182 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
LSM2-212ENST00000477182 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
LSM2-212ENST00000477182 SIRT2Q8IXJ6 389 aa14.28□□□□□ -0.12
LSM2-212ENST00000477182 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
LSM2-212ENST00000477182 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
LSM2-212ENST00000477182 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
LSM2-212ENST00000477182 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
LSM2-212ENST00000477182 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
LSM2-212ENST00000477182 CSF1RP07333 972 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 IL1R1P14778 569 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 CTGFP29279 349 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 MTX1Q13505 466 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 C15orf52Q6ZUT6 534 aaKnown RBP14.27□□□□□ -0.13
LSM2-212ENST00000477182 ZNF804AQ7Z570 1209 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 CPA4Q9UI42 421 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.13
LSM2-212ENST00000477182 AOX1Q06278 1338 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 IRF6O14896 467 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 FCGRTP55899 365 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 PPIL2Q13356 520 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 PRDM6Q9NQX0 595 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
LSM2-212ENST00000477182 HMMRO75330 724 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 BCAMP50895 628 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 CHRNDQ07001 517 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 POLA2Q14181 598 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 NECAB2Q7Z6G3 386 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 HOOK2Q96ED9 719 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 TDRD3Q9H7E2 651 aaKnown RBP14.25□□□□□ -0.13
LSM2-212ENST00000477182 SNCAIPQ9Y6H5 919 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 ALPK3Q96L96 1907 aa14.25□□□□□ -0.13
LSM2-212ENST00000477182 ADGRA2Q96PE1 1338 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 IGHDP01880 384 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 ITGA6P23229 1130 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 PRKCZQ05513 592 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
LSM2-212ENST00000477182 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
LSM2-212ENST00000477182 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
LSM2-212ENST00000477182 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms