RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 LRRC14Q15048 493 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 LLGL2Q6P1M3 1020 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 BNC2Q6ZN30 1099 aaPredicted RBP9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 Q8N3U1 123 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 DHX38Q92620 1227 aaKnown RBP9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 JARID2Q92833 1246 aaPredicted RBP9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 MIR1-1HGQ9H1L0 117 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 UBP1Q9NZI7 540 aa9.01□□□□□ -0.97
FNDC3B-208ENST00000476794 FSCN2O14926 492 aa9□□□□□ -0.97
FNDC3B-208ENST00000476794 GTF2F1P35269 517 aaKnown RBP eCLIP9□□□□□ -0.971e-19■■■■■ 38
FNDC3B-208ENST00000476794 PIP4K2BP78356 416 aa9□□□□□ -0.97
FNDC3B-208ENST00000476794 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
FNDC3B-208ENST00000476794 AP3B2Q13367 1082 aa9□□□□□ -0.97
FNDC3B-208ENST00000476794 COL9A3Q14050 684 aaPredicted RBP9□□□□□ -0.97
FNDC3B-208ENST00000476794 BUD13Q9BRD0 619 aaKnown RBP eCLIP9□□□□□ -0.97
FNDC3B-208ENST00000476794 CARD10Q9BWT7 1032 aa9□□□□□ -0.97
FNDC3B-208ENST00000476794 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
FNDC3B-208ENST00000476794 F13A1P00488 732 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 PDZD3Q86UT5 571 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 MCF2L2Q86YR7 1114 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 WNT8BQ93098 351 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 NKD1Q969G9 470 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 GINM1Q9NU53 330 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
FNDC3B-208ENST00000476794 TLR3O15455 904 aaKnown RBP8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 GSTP1P09211 210 aaKnown RBP8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 FGRP09769 529 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 CRKP46108 304 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 NASPP49321 788 aaPredicted RBP8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 MAP1SQ66K74 1059 aaPredicted RBP8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 FAM196AQ6ZSG2 479 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 DMRTC2Q8IXT2 367 aaPredicted RBP8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 FBXO27Q8NI29 283 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 KCNB2Q92953 911 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 KLHDC7BQ96G42 594 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 SEC16BQ96JE7 1060 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 SPATA32Q96LK8 384 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 PLVAPQ9BX97 442 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 OSGEPQ9NPF4 335 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
FNDC3B-208ENST00000476794 SPATA31C1P0DKV0 1188 aa8.97□□□□□ -0.97
FNDC3B-208ENST00000476794 CCDC84Q86UT8 332 aaPredicted RBP8.97□□□□□ -0.97
FNDC3B-208ENST00000476794 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
FNDC3B-208ENST00000476794 GAL3ST3Q96A11 431 aa8.97□□□□□ -0.97
FNDC3B-208ENST00000476794 DNAJC2Q99543 621 aaKnown RBP8.97□□□□□ -0.97
FNDC3B-208ENST00000476794 ECEL1O95672 775 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 CYP11A1P05108 521 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 NID1P14543 1247 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 PTPN11Q06124 597 aaPredicted RBP8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 SETDB1Q15047 1291 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 POU4F3Q15319 338 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 SEZ6Q53EL9 994 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 CORO1BQ9BR76 489 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 KRTAP4-8Q9BYQ9 185 aa8.96□□□□□ -0.98
FNDC3B-208ENST00000476794 FAM221AA4D161 298 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 TRIM37O94972 964 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 MAOBP27338 520 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 NRSN2Q9GZP1 204 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
FNDC3B-208ENST00000476794 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 STK10O94804 968 aaKnown RBP8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 CTSBP07858 339 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 NLRP12P59046 1061 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 MPP2Q14168 576 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 ILDR2Q71H61 639 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 SLITRK4Q8IW52 837 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 KLHL23Q8NBE8 558 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 ARMC5Q96C12 935 aa8.94□□□□□ -0.98
FNDC3B-208ENST00000476794 TM4SF5O14894 197 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 DDX3YO15523 660 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 CILPO75339 1184 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 BPNT1O95861 308 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 GATA4P43694 442 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 SOX9P48436 509 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 COL9A2Q14055 689 aaPredicted RBP8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 TRAPPC3LQ5T215 181 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 GPBAR1Q8TDU6 330 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 ACSBG1Q96GR2 724 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 USP26Q9BXU7 913 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 LRRC3Q9BY71 257 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 CCDC86Q9H6F5 360 aaKnown RBP8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 SHROOM4Q9ULL8 1493 aa8.93□□□□□ -0.98
FNDC3B-208ENST00000476794 MCM4P33991 863 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 DOC2BQ14184 412 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 PDE3AQ14432 1141 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 CWF19L2Q2TBE0 894 aaKnown RBP8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 NKAPLQ5M9Q1 402 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 SCARA3Q6AZY7 606 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 BRMS1Q9HCU9 246 aa8.92□□□□□ -0.98
FNDC3B-208ENST00000476794 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms