RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 C1orf115Q9H7X2 142 aa20.01■□□□□ 0.79
COL1A1-205ENST00000476387 HPS5Q9UPZ3 1129 aa20.01■□□□□ 0.79
COL1A1-205ENST00000476387 LDHBP07195 334 aaKnown RBP20■□□□□ 0.79
COL1A1-205ENST00000476387 PHKA1P46020 1223 aa20■□□□□ 0.79
COL1A1-205ENST00000476387 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
COL1A1-205ENST00000476387 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
COL1A1-205ENST00000476387 DAGLAQ9Y4D2 1042 aa20■□□□□ 0.79
COL1A1-205ENST00000476387 PDS5AQ29RF7 1337 aaKnown RBP20■□□□□ 0.79
COL1A1-205ENST00000476387 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-205ENST00000476387 PRDX5P30044 214 aa19.99■□□□□ 0.79
COL1A1-205ENST00000476387 TFCP2Q12800 502 aa19.99■□□□□ 0.79
COL1A1-205ENST00000476387 DCAF15Q66K64 600 aa19.99■□□□□ 0.79
COL1A1-205ENST00000476387 CCDC102BQ68D86 513 aa19.99■□□□□ 0.79
COL1A1-205ENST00000476387 FBXO46Q6PJ61 603 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-205ENST00000476387 MS4A4AQ96JQ5 239 aa19.99■□□□□ 0.79
COL1A1-205ENST00000476387 GTF2A2P52657 109 aa19.98■□□□□ 0.79
COL1A1-205ENST00000476387 ZGPATQ8N5A5 531 aaKnown RBP19.98■□□□□ 0.79
COL1A1-205ENST00000476387 FAM151AQ8WW52 585 aa19.98■□□□□ 0.79
COL1A1-205ENST00000476387 PTPN18Q99952 460 aa19.98■□□□□ 0.79
COL1A1-205ENST00000476387 A0A1B0GUL7 405 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 SPDYE5A6NIY4 337 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 ADORA1P30542 326 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 ATP8B2P98198 1209 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 OS9Q13438 667 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-205ENST00000476387 DIXDC1Q155Q3 683 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 CDC42EP5Q6NZY7 148 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-205ENST00000476387 SSH3Q8TE77 659 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 WRNIP1Q96S55 665 aa19.97■□□□□ 0.79
COL1A1-205ENST00000476387 TIMM10P62072 90 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 CRHR2Q13324 411 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 RASGRF1Q13972 1273 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 POLA2Q14181 598 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
COL1A1-205ENST00000476387 CNKSR2Q8WXI2 1034 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 OTUD5Q96G74 571 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 SNCAIPQ9Y6H5 919 aa19.96■□□□□ 0.79
COL1A1-205ENST00000476387 SOX10P56693 466 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 ERO1BQ86YB8 467 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 BRI3BPQ8WY22 251 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 NEUROD6Q96NK8 337 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 ZNF341Q9BYN7 854 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
COL1A1-205ENST00000476387 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 CCL15-CCL14A0A0B4J2E2 113 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 CCL15Q16663 113 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 GORABQ5T7V8 394 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 SLF2Q8IX21 1173 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 XAGE2Q96GT9 111 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 CHMP4BQ9H444 224 aaKnown RBP19.94■□□□□ 0.78
COL1A1-205ENST00000476387 USP40Q9NVE5 1235 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 GAKO14976 1311 aa19.94■□□□□ 0.78
COL1A1-205ENST00000476387 SURF6O75683 361 aaKnown RBP19.93■□□□□ 0.78
COL1A1-205ENST00000476387 CETPP11597 493 aa19.93■□□□□ 0.78
COL1A1-205ENST00000476387 NFIAQ12857 509 aa19.93■□□□□ 0.78
COL1A1-205ENST00000476387 SPTY2D1Q68D10 685 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-205ENST00000476387 CEP85Q6P2H3 762 aa19.93■□□□□ 0.78
COL1A1-205ENST00000476387 ZKSCAN4Q969J2 545 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-205ENST00000476387 FAM163AQ96GL9 167 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-205ENST00000476387 ZCCHC17Q9NP64 241 aaKnown RBP19.93■□□□□ 0.78
COL1A1-205ENST00000476387 TCP10Q12799 353 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 PPIL2Q13356 520 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 OTOP1Q7RTM1 612 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 DZIP1Q86YF9 867 aaKnown RBP19.92■□□□□ 0.78
COL1A1-205ENST00000476387 YTHDC1Q96MU7 727 aaKnown RBP19.92■□□□□ 0.78
COL1A1-205ENST00000476387 IDI2Q9BXS1 227 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 FAM198AQ9UFP1 575 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 TRIM17Q9Y577 477 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 PDE4DIPQ5VU43 2346 aa19.92■□□□□ 0.78
COL1A1-205ENST00000476387 SP3Q02447 781 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 PPATQ06203 517 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 SNAPC2Q13487 334 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 TAF1CQ15572 869 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-205ENST00000476387 MIGA2Q7L4E1 593 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 ZFYVE28Q9HCC9 887 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 ABCF2Q9UG63 623 aa19.91■□□□□ 0.78
COL1A1-205ENST00000476387 HTTP42858 3142 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 IRF6O14896 467 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 ENTPD3O75355 529 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-205ENST00000476387 PDE3AQ14432 1141 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-205ENST00000476387 RFX7Q2KHR2 1363 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 AK9Q5TCS8 1911 aa19.9■□□□□ 0.78
COL1A1-205ENST00000476387 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.77
COL1A1-205ENST00000476387 INPP5BP32019 993 aa19.89■□□□□ 0.77
COL1A1-205ENST00000476387 NOL9Q5SY16 702 aaKnown RBP19.89■□□□□ 0.77
COL1A1-205ENST00000476387 CD99L2Q8TCZ2 262 aa19.89■□□□□ 0.77
COL1A1-205ENST00000476387 GPR108Q9NPR9 543 aa19.89■□□□□ 0.77
COL1A1-205ENST00000476387 NOP58Q9Y2X3 529 aaKnown RBP19.89■□□□□ 0.77
COL1A1-205ENST00000476387 ARID4AP29374 1257 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-205ENST00000476387 RGS3P49796 1198 aa19.88■□□□□ 0.77
COL1A1-205ENST00000476387 ARHGEF6Q15052 776 aa19.88■□□□□ 0.77
COL1A1-205ENST00000476387 TNNI3KQ59H18 835 aa19.88■□□□□ 0.77
COL1A1-205ENST00000476387 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
COL1A1-205ENST00000476387 EFCC1Q9HA90 598 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms