RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 VGLL4Q14135 290 aa22.77■■□□□ 1.24
DNMT3A-210ENST00000474807 CDC42EP5Q6NZY7 148 aa22.77■■□□□ 1.24
DNMT3A-210ENST00000474807 PDS5AQ29RF7 1337 aaKnown RBP22.77■■□□□ 1.24
DNMT3A-210ENST00000474807 ZGPATQ8N5A5 531 aaKnown RBP22.76■■□□□ 1.23
DNMT3A-210ENST00000474807 RGS19P49795 217 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 MVPQ14764 893 aaKnown RBP22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 FAM151AQ8WW52 585 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 CNKSR2Q8WXI2 1034 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 HOOK2Q96ED9 719 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 MS4A4AQ96JQ5 239 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 PTPN18Q99952 460 aa22.75■■□□□ 1.23
DNMT3A-210ENST00000474807 NFIAQ12857 509 aa22.74■■□□□ 1.23
DNMT3A-210ENST00000474807 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.234e-6■□□□□ 9.2
DNMT3A-210ENST00000474807 NEUROD6Q96NK8 337 aa22.74■■□□□ 1.23
DNMT3A-210ENST00000474807 CSADQ9Y600 493 aa22.74■■□□□ 1.23
DNMT3A-210ENST00000474807 FKTNO75072 461 aa22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 RLBP1P12271 317 aa22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 POLA2Q14181 598 aa22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 FTSJ3Q8IY81 847 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 USP40Q9NVE5 1235 aa22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 GAKO14976 1311 aa22.73■■□□□ 1.23
DNMT3A-210ENST00000474807 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 ATP8B2P98198 1209 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 PKN2Q16513 984 aaKnown RBP22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 OTUD7BQ6GQQ9 843 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 SSH3Q8TE77 659 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 WRNIP1Q96S55 665 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 FAM198AQ9UFP1 575 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 ABCF2Q9UG63 623 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 SNCAIPQ9Y6H5 919 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 MYH2Q9UKX2 1941 aa22.72■■□□□ 1.23
DNMT3A-210ENST00000474807 SPDYE5A6NIY4 337 aa22.71■■□□□ 1.23
DNMT3A-210ENST00000474807 TCP10Q12799 353 aa22.71■■□□□ 1.23
DNMT3A-210ENST00000474807 DCAF15Q66K64 600 aa22.71■■□□□ 1.23
DNMT3A-210ENST00000474807 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
DNMT3A-210ENST00000474807 ZKSCAN4Q969J2 545 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-210ENST00000474807 SPTY2D1Q68D10 685 aaPredicted RBP22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 DZIP1Q86YF9 867 aaKnown RBP22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 BRI3BPQ8WY22 251 aa22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 OTUD5Q96G74 571 aa22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 FAM163AQ96GL9 167 aaPredicted RBP22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 ZNF341Q9BYN7 854 aa22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 C1orf115Q9H7X2 142 aa22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 HMG20BQ9P0W2 317 aa22.7■■□□□ 1.22
DNMT3A-210ENST00000474807 ARID4AP29374 1257 aaPredicted RBP22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 GTF2A2P52657 109 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 CRHR2Q13324 411 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 ERO1BQ86YB8 467 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 ITPRIPQ8IWB1 547 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 IDI2Q9BXS1 227 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 HPS5Q9UPZ3 1129 aa22.69■■□□□ 1.22
DNMT3A-210ENST00000474807 RFX7Q2KHR2 1363 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 CCL15Q16663 113 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 GORABQ5T7V8 394 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 PI16Q6UXB8 463 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 ZFPM1Q8IX07 1006 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 SLF2Q8IX21 1173 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 SPATA5Q8NB90 893 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 GPR108Q9NPR9 543 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 ZNF112Q9UJU3 913 aa22.68■■□□□ 1.22
DNMT3A-210ENST00000474807 MECOMQ03112 1051 aa22.67■■□□□ 1.22
DNMT3A-210ENST00000474807 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
DNMT3A-210ENST00000474807 ZNF384Q8TF68 577 aa22.67■■□□□ 1.22
DNMT3A-210ENST00000474807 MROH7-TTC4A0A0A0MT08 1334 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 IRF6O14896 467 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 ENTPD3O75355 529 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 INPP5BP32019 993 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 RGS3P49796 1198 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 MLLT1Q03111 559 aaPredicted RBP22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 FBXO46Q6PJ61 603 aaPredicted RBP22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 HTTP42858 3142 aa22.66■■□□□ 1.22
DNMT3A-210ENST00000474807 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 AK9Q5TCS8 1911 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 SURF6O75683 361 aaKnown RBP22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 MCAMP43121 646 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 BTDP43251 543 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 PPATQ06203 517 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 PPIL2Q13356 520 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 TNNI3KQ59H18 835 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 TBC1D9Q6ZT07 1266 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 NOP58Q9Y2X3 529 aaKnown RBP22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 FPGT-TNNI3KV9GXZ4 949 aa22.65■■□□□ 1.22
DNMT3A-210ENST00000474807 GPR75-ASB3A0A0A6YYF3 556 aa22.64■■□□□ 1.21
DNMT3A-210ENST00000474807 WDHD1O75717 1129 aaPredicted RBP22.64■■□□□ 1.21
DNMT3A-210ENST00000474807 UQCRFS1P1P0C7P4 283 aa22.64■■□□□ 1.21
DNMT3A-210ENST00000474807 SH3BP5LQ7L8J4 393 aa22.64■■□□□ 1.21
DNMT3A-210ENST00000474807 NSUN4Q96CB9 384 aaKnown RBP22.64■■□□□ 1.21
DNMT3A-210ENST00000474807 CETPP11597 493 aa22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 RHBDL3P58872 404 aa22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 SNAPC2Q13487 334 aa22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 PANK1Q8TE04 598 aa22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 DDX4Q9NQI0 724 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 TRIM17Q9Y577 477 aa22.63■■□□□ 1.21
DNMT3A-210ENST00000474807 CENPFP49454 3210 aa22.62■■□□□ 1.21
DNMT3A-210ENST00000474807 DOCK2Q92608 1830 aa22.62■■□□□ 1.21
DNMT3A-210ENST00000474807 SOX10P56693 466 aa22.62■■□□□ 1.21
DNMT3A-210ENST00000474807 SP3Q02447 781 aa22.62■■□□□ 1.21
DNMT3A-210ENST00000474807 OS9Q13438 667 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms