RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 XRCC5P13010 732 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 DNAJA1P31689 397 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 CTHP32929 405 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 IDI1Q13907 227 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 PPP2R5AQ15172 486 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF394Q53GI3 561 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 INO80DQ53TQ3 878 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 ESCO1Q5FWF5 840 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 MIGA1Q8NAN2 632 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 AGAP3Q96P47 875 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 ARNT2Q9HBZ2 717 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 INTUQ9ULD6 942 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 GJA3Q9Y6H8 435 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 ADAMTS13Q76LX8 1427 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 COL14A1Q05707 1796 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 CLCN1P35523 988 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TSPAN7P41732 249 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 EMP3P54852 163 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 DMTNQ08495 405 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TRIM29Q14134 588 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 NFXL1Q6ZNB6 911 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TAS1R3Q7RTX0 852 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 METTL16Q86W50 562 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 MTMR14Q8NCE2 650 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TSPY26PQ9H489 355 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 CCSER2Q9H7U1 834 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 EVLQ9UI08 416 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 AXIN2Q9Y2T1 843 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 SLC26A4O43511 780 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 NOS2P35228 1153 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 NUDT18Q6ZVK8 323 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 MYRIPQ8NFW9 859 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 HELQQ8TDG4 1101 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 SMCR8Q8TEV9 937 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 CENPTQ96BT3 561 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 PAWRQ96IZ0 340 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TGIF2Q9GZN2 237 aa7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 FBXO2Q9UK22 296 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-208ENST00000474246 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 TPM3P06753 285 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 MYL3P08590 195 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 CDC27P30260 824 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 MRPL58Q14197 206 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 HDGFL2Q7Z4V5 671 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 TMUB1Q9BVT8 246 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 NALCNQ8IZF0 1738 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 FAM205CA6NFA0 338 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 LETM1O95202 739 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 MYL1P05976 194 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 SETSIPP0DME0 302 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 PSMA3P25788 255 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 MAP2K2P36507 400 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 ARMC3Q5W041 872 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 ERCC4Q92889 916 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 MAP3K14Q99558 947 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 PPCSQ9HAB8 311 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 KMT5AQ9NQR1 393 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 COMMD8Q9NX08 183 aa7.18□□□□□ -1.26
SMARCE1-208ENST00000474246 ZFYVE9O95405 1425 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 USP6P35125 1406 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 RIMS2Q9UQ26 1411 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 ORC4O43929 436 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 TOMM20Q15388 145 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF827Q17R98 1081 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 FAM133BQ5BKY9 247 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 LDLRAD1Q5T700 205 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 POTEEQ6S8J3 1075 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 BRSK2Q8IWQ3 736 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 MNS1Q8NEH6 495 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 CABLES1Q8TDN4 633 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 VMP1Q96GC9 406 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 MRFAP1L1Q96HT8 127 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 TSPYL1Q9H0U9 437 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 DHX36Q9H2U1 1008 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 EFCC1Q9HA90 598 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 LGR6Q9HBX8 967 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 PRM3Q9NNZ6 103 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 PNMA3Q9UL41 463 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 RABL2BQ9UNT1 228 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 PPP2R3BQ9Y5P8 575 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 CCDC144AA2RUR9 1427 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 QSER1Q2KHR3 1735 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 ARHGEF10O15013 1369 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 PNPLA7Q6ZV29 1317 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 PASKQ96RG2 1323 aa7.17□□□□□ -1.26
SMARCE1-208ENST00000474246 TMEM110-MUSTN1A8MSY1 372 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 DIAPH1O60610 1272 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 RFC5P40937 340 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 ZBED6P86452 979 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 DNAJC21Q5F1R6 531 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 BHMTQ93088 406 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms