RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
CD46-213ENST00000471987 ACSS3Q9H6R3 686 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 FAM105AQ9NUU6 356 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 NFICP08651 508 aa9.09□□□□□ -0.95
CD46-213ENST00000471987 HOXA10P31260 410 aaPredicted RBP9.09□□□□□ -0.95
CD46-213ENST00000471987 ZNF157P51786 506 aaPredicted RBP9.09□□□□□ -0.95
CD46-213ENST00000471987 FCGRTP55899 365 aa9.09□□□□□ -0.95
CD46-213ENST00000471987 PPP2R3AQ06190 1150 aa9.09□□□□□ -0.95
CD46-213ENST00000471987 WDR18Q9BV38 432 aa9.09□□□□□ -0.95
CD46-213ENST00000471987 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
CD46-213ENST00000471987 TREHO43280 583 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 ADAMTS4O75173 837 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 ADMP35318 185 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 IRAK1P51617 712 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 DSC3Q14574 896 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 MCTP1Q6DN14 999 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
CD46-213ENST00000471987 GPN3Q9UHW5 284 aaPredicted RBP9.08□□□□□ -0.96
CD46-213ENST00000471987 OAS3Q9Y6K5 1087 aaKnown RBP9.08□□□□□ -0.96
CD46-213ENST00000471987 PNMA6FA0A0J9YX94 578 aa9.07□□□□□ -0.96
CD46-213ENST00000471987 CYP27A1Q02318 531 aa9.07□□□□□ -0.96
CD46-213ENST00000471987 ENOX2Q16206 610 aaKnown RBP9.07□□□□□ -0.96
CD46-213ENST00000471987 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
CD46-213ENST00000471987 CCDC86Q9H6F5 360 aaKnown RBP9.07□□□□□ -0.96
CD46-213ENST00000471987 TMEM39AQ9NV64 488 aa9.07□□□□□ -0.96
CD46-213ENST00000471987 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
CD46-213ENST00000471987 GSTP1P09211 210 aaKnown RBP9.06□□□□□ -0.96
CD46-213ENST00000471987 SLFN14P0C7P3 912 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD46-213ENST00000471987 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 GATA6Q92908 595 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 KRT82Q9NSB4 513 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 PPP1R9AQ9ULJ8 1098 aa9.06□□□□□ -0.96
CD46-213ENST00000471987 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
CD46-213ENST00000471987 CYP26A1O43174 497 aa9.05□□□□□ -0.96
CD46-213ENST00000471987 LIG1P18858 919 aa9.05□□□□□ -0.96
CD46-213ENST00000471987 ZSCAN29Q8IWY8 852 aaPredicted RBP9.05□□□□□ -0.96
CD46-213ENST00000471987 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
CD46-213ENST00000471987 ANGEL1Q9UNK9 670 aaKnown RBP9.05□□□□□ -0.96
CD46-213ENST00000471987 DAGLAQ9Y4D2 1042 aa9.05□□□□□ -0.96
CD46-213ENST00000471987 TMPRSS2O15393 492 aa9.04□□□□□ -0.96
CD46-213ENST00000471987 NXPE4Q6UWF7 544 aa9.04□□□□□ -0.96
CD46-213ENST00000471987 CRIM1Q9NZV1 1036 aa9.04□□□□□ -0.96
CD46-213ENST00000471987 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
CD46-213ENST00000471987 ID3Q02535 119 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 KCNA1Q09470 495 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 SEZ6L2Q6UXD5 910 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 WDR89Q96FK6 387 aaPredicted RBP9.03□□□□□ -0.96
CD46-213ENST00000471987 ATXN3LQ9H3M9 355 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 PIDD1Q9HB75 910 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 IVNS1ABPQ9Y6Y0 642 aa9.03□□□□□ -0.96
CD46-213ENST00000471987 ZNF862O60290 1169 aa9.02□□□□□ -0.97
CD46-213ENST00000471987 PRNPP04156 253 aa9.02□□□□□ -0.97
CD46-213ENST00000471987 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
CD46-213ENST00000471987 KCNB2Q92953 911 aa9.02□□□□□ -0.97
CD46-213ENST00000471987 C1GALT1Q9NS00 363 aa9.02□□□□□ -0.97
CD46-213ENST00000471987 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
CD46-213ENST00000471987 ZNF765Q7L2R6 523 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 VSIG10LQ86VR7 867 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 FANCD2OSQ96PS1 177 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 SRCIN1Q9C0H9 1055 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
CD46-213ENST00000471987 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
CD46-213ENST00000471987 ARNTP27540 789 aa9□□□□□ -0.97
CD46-213ENST00000471987 MAPK8P45983 427 aa9□□□□□ -0.97
CD46-213ENST00000471987 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
CD46-213ENST00000471987 OGFOD3Q6PK18 319 aa9□□□□□ -0.97
CD46-213ENST00000471987 ASB16Q96NS5 453 aa9□□□□□ -0.97
CD46-213ENST00000471987 EMILIN2Q9BXX0 1053 aa9□□□□□ -0.97
CD46-213ENST00000471987 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
CD46-213ENST00000471987 PAX4O43316 350 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 NME2P22392 152 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 GSTT1P30711 240 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 LGR6Q9HBX8 967 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 LRRC4CQ9HCJ2 640 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 DISC1Q9NRI5 854 aa8.99□□□□□ -0.97
CD46-213ENST00000471987 TAL1P17542 331 aaPredicted RBP8.98□□□□□ -0.97
CD46-213ENST00000471987 CYP27C1Q4G0S4 372 aa8.98□□□□□ -0.97
CD46-213ENST00000471987 ALG1LQ6GMV1 187 aa8.98□□□□□ -0.97
CD46-213ENST00000471987 SMYD4Q8IYR2 804 aaPredicted RBP8.98□□□□□ -0.97
CD46-213ENST00000471987 GIPC1O14908 333 aa8.97□□□□□ -0.97
CD46-213ENST00000471987 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
CD46-213ENST00000471987 MAP1SQ66K74 1059 aaPredicted RBP8.97□□□□□ -0.97
CD46-213ENST00000471987 STK35Q8TDR2 534 aa8.97□□□□□ -0.97
CD46-213ENST00000471987 NECAB3Q96P71 396 aaPredicted RBP8.97□□□□□ -0.97
CD46-213ENST00000471987 CEP44Q9C0F1 390 aa8.97□□□□□ -0.97
CD46-213ENST00000471987 ZC3H7BQ9UGR2 993 aaKnown RBP8.97□□□□□ -0.97
CD46-213ENST00000471987 PPM1HQ9ULR3 514 aa8.97□□□□□ -0.97
CD46-213ENST00000471987 TTLL4Q14679 1199 aa8.96□□□□□ -0.98
CD46-213ENST00000471987 SAMM50Q9Y512 469 aa8.96□□□□□ -0.98
CD46-213ENST00000471987 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
CD46-213ENST00000471987 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms