RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 DMRTC2Q8IXT2 367 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 JARID2Q92833 1246 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 KLHDC7BQ96G42 594 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 NRSN2Q9GZP1 204 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 PIK3R2O00459 728 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 F13A1P00488 732 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 ZNF165P49910 485 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 HGSNATQ68CP4 663 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 TXNDC11Q6PKC3 985 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 KCNB2Q92953 911 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 SYNGAP1Q96PV0 1343 aa6.75□□□□□ -1.33
CDC42BPA-211ENST00000466538 SPDYE3A6NKU9 549 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 TM4SF5O14894 197 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 BPNT1O95861 308 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 SSBP05455 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 MAOBP27338 520 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 NASPP49321 788 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 DGKGP49619 791 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 RPL6Q02878 288 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 TRAPPC3LQ5T215 181 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 MAP1SQ66K74 1059 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 TREML4Q6UXN2 200 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 NEDD1Q8NHV4 660 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 DHX38Q92620 1227 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 GAL3ST3Q96A11 431 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 SNCAIPQ9Y6H5 919 aa6.74□□□□□ -1.33
CDC42BPA-211ENST00000466538 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 CRKP46108 304 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 SEPT6Q14141 434 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 SEZ6Q53EL9 994 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 FBXO11Q86XK2 927 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 TACC3Q9Y6A5 838 aa6.73□□□□□ -1.33
CDC42BPA-211ENST00000466538 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 IMPDH2P12268 514 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 RAC1P63000 192 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 PTPN11Q06124 597 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 LCE2CQ5TA81 110 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 GALNT11Q8NCW6 608 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 ZNF775Q96BV0 537 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-211ENST00000466538 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 TLR3O15455 904 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 DEAF1O75398 565 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 ATE1O95260 518 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 MCM4P33991 863 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 EXOSC6Q5RKV6 272 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 LINC00114Q6XXX2 140 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 HDXQ7Z353 690 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 FBXO27Q8NI29 283 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 WHAMMQ8TF30 809 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 ACSBG1Q96GR2 724 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 NBPF4Q96M43 638 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 SRRTQ9BXP5 876 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 EHMT1Q9H9B1 1298 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 RRAGCQ9HB90 399 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
CDC42BPA-211ENST00000466538 A0A0A0MRY4 1105 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 MEGF11A6BM72 1044 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 GFRA2O00451 464 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 DLL1O00548 723 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 NLRP12P59046 1061 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 PDE3AQ14432 1141 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 MPRIPQ6WCQ1 1025 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 FMR1NBQ8N0W7 255 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 RBBP8NLQ8NC74 664 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 CRBNQ96SW2 442 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 PRR36Q9H6K5 1346 aa6.7□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZNF862O60290 1169 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 ECEL1O95672 775 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 TRIM28Q13263 835 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 IGF2-ASQ6U949 168 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 OR6P1Q8NGX9 317 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 FERD3LQ96RJ6 166 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 DNAJC2Q99543 621 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
CDC42BPA-211ENST00000466538 MKL2Q9ULH7 1088 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms