RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 AAMPQ13685 434 aa5.87□□□□□ -1.47
CD55-207ENST00000465534 HP1BP3Q5SSJ5 553 aaPredicted RBP5.87□□□□□ -1.47
CD55-207ENST00000465534 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
CD55-207ENST00000465534 GLIS3Q8NEA6 775 aa5.87□□□□□ -1.47
CD55-207ENST00000465534 CLEC4MQ9H2X3 399 aaPredicted RBP5.87□□□□□ -1.47
CD55-207ENST00000465534 NESP48681 1621 aa5.87□□□□□ -1.47
CD55-207ENST00000465534 POLR3DP05423 398 aaPredicted RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 CD8BP10966 210 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 FUT4P22083 530 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 MTMR3Q13615 1198 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 SPRED3Q2MJR0 410 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 CYP27C1Q4G0S4 372 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 ALKBH2Q6NS38 261 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 PLD6Q8N2A8 252 aaKnown RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 FAM181AQ8N9Y4 354 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 GTF3C2Q8WUA4 911 aaPredicted RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 GSX1Q9H4S2 264 aaPredicted RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
CD55-207ENST00000465534 ADAMTS6Q9UKP5 1117 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 KIF21AQ7Z4S6 1674 aa5.86□□□□□ -1.47
CD55-207ENST00000465534 CD96P40200 585 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 GRIA4P48058 902 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 EHHADHQ08426 723 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 CORO1BQ9BR76 489 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 TRIM56Q9BRZ2 755 aaKnown RBP5.85□□□□□ -1.47
CD55-207ENST00000465534 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 ZFYVE28Q9HCC9 887 aa5.85□□□□□ -1.47
CD55-207ENST00000465534 AOC2O75106 756 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 CCNJLQ8IV13 435 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 NETO1Q8TDF5 533 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 TMEM40Q8WWA1 233 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 SLC38A3Q99624 504 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 ZFYVE1Q9HBF4 777 aa5.84□□□□□ -1.47
CD55-207ENST00000465534 RSF1Q96T23 1441 aaPredicted RBP5.84□□□□□ -1.47
CD55-207ENST00000465534 FAM87AP0C7U9 286 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 CDK5R2Q13319 367 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 PI4K2BQ8TCG2 481 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 WDR18Q9BV38 432 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 LIN7BQ9HAP6 207 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 PPP1R9AQ9ULJ8 1098 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 KDM6BO15054 1643 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 A0A1W2PP55 124 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 PDE3AQ14432 1141 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 TCF12Q99081 682 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 U3KQE9 123 aa5.83□□□□□ -1.48
CD55-207ENST00000465534 USP5P45974 858 aa5.82□□□□□ -1.48
CD55-207ENST00000465534 DDX54Q8TDD1 881 aaKnown RBP5.82□□□□□ -1.48
CD55-207ENST00000465534 PBXIP1Q96AQ6 731 aa5.82□□□□□ -1.48
CD55-207ENST00000465534 VAV3Q9UKW4 847 aa5.82□□□□□ -1.48
CD55-207ENST00000465534 B3GALT4O96024 378 aa5.81□□□□□ -1.48
CD55-207ENST00000465534 PRKCQQ04759 706 aa5.81□□□□□ -1.48
CD55-207ENST00000465534 MESP2Q0VG99 397 aa5.81□□□□□ -1.48
CD55-207ENST00000465534 TMPRSS2O15393 492 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 FZD6O60353 706 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 NPR3P17342 541 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 AOC3Q16853 763 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 FAM84AQ96KN4 292 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 CCDC87Q9NVE4 849 aa5.8□□□□□ -1.48
CD55-207ENST00000465534 LRRC10BA6NIK2 292 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 LIG1P18858 919 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 GALNT12Q8IXK2 581 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 GJD3Q8N144 294 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 ZNF576Q9H609 170 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 PIDD1Q9HB75 910 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.79□□□□□ -1.48
CD55-207ENST00000465534 KIF13AQ9H1H9 1805 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 WDR62O43379 1518 aa5.79□□□□□ -1.48
CD55-207ENST00000465534 LEFTY1O75610 366 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 FAM13AO94988 1023 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 ZNF865P0CJ78 1059 aaPredicted RBP5.78□□□□□ -1.48
CD55-207ENST00000465534 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
CD55-207ENST00000465534 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 WDR89Q96FK6 387 aaPredicted RBP5.78□□□□□ -1.48
CD55-207ENST00000465534 HRASLS5Q96KN8 279 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 CRIM1Q9NZV1 1036 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 SYNGAP1Q96PV0 1343 aa5.78□□□□□ -1.48
CD55-207ENST00000465534 SMYD4Q8IYR2 804 aaPredicted RBP5.77□□□□□ -1.49
CD55-207ENST00000465534 CCER1Q8TC90 406 aaPredicted RBP5.77□□□□□ -1.49
CD55-207ENST00000465534 FANCD2OSQ96PS1 177 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 ZC3H12CQ9C0D7 883 aaKnown RBP5.77□□□□□ -1.49
CD55-207ENST00000465534 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 CEACAM5P06731 702 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 OXCT1P55809 520 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 AP3B2Q13367 1082 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 MLANAQ16655 118 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.49
CD55-207ENST00000465534 USPL1Q5W0Q7 1092 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 SLC23A3Q6PIS1 610 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 ZSWIM9Q86XI8 627 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 CILP2Q8IUL8 1156 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 ATXN3LQ9H3M9 355 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 CCDC86Q9H6F5 360 aaKnown RBP5.77□□□□□ -1.49
CD55-207ENST00000465534 PLAGL2Q9UPG8 496 aa5.77□□□□□ -1.49
CD55-207ENST00000465534 MRC2Q9UBG0 1479 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms