RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CLNS1AP54105 237 aaKnown RBP11.09□□□□□ -0.63
UFD1-205ENST00000459854 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 PANK2Q9BZ23 570 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 ATP5J2-PTCD1G3V325 749 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 ATP11AP98196 1134 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 AMPD3Q01432 767 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 ATL3Q6DD88 541 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 CWC27Q6UX04 472 aaKnown RBP11.09□□□□□ -0.63
UFD1-205ENST00000459854 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 UBASH3AP57075 661 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 ZNF445P59923 1031 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 SETDB1Q15047 1291 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 CCDC110Q8TBZ0 833 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
UFD1-205ENST00000459854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.632e-9■□□□□ 9.8
UFD1-205ENST00000459854 BCL9O00512 1426 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 SMC6Q96SB8 1091 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 VAV2P52735 878 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 GBP1P32455 592 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 KCNQ4P56696 695 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 DMTNQ08495 405 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 MPHOSPH8Q99549 860 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 RRAGDQ9NQL2 400 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 KRT86O43790 486 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 BANK1Q8NDB2 785 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
UFD1-205ENST00000459854 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
UFD1-205ENST00000459854 GJB2P29033 226 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
UFD1-205ENST00000459854 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 AACSQ86V21 672 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 SEPT11Q9NVA2 429 aaKnown RBP11.07□□□□□ -0.64
UFD1-205ENST00000459854 USP54Q70EL1 1684 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 CEP128Q6ZU80 1094 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 ATP5DP30049 168 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 AP1ARQ63HQ0 302 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 SCLT1Q96NL6 688 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 TRIM27P14373 513 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 ANO6Q4KMQ2 910 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 FERMT3Q86UX7 667 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 CNNM1Q9NRU3 951 aa11.07□□□□□ -0.64
UFD1-205ENST00000459854 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
UFD1-205ENST00000459854 TSGA10Q9BZW7 698 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
UFD1-205ENST00000459854 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 LRCH2Q5VUJ6 765 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 MYO1BO43795 1136 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 SYT1P21579 422 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
UFD1-205ENST00000459854 TRMT2AQ8IZ69 625 aaKnown RBP11.06□□□□□ -0.64
UFD1-205ENST00000459854 CDC5LQ99459 802 aaKnown RBP11.06□□□□□ -0.64
UFD1-205ENST00000459854 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 ALDH3A1P30838 453 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 SLC8A1P32418 973 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 CETN1Q12798 172 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 TCIRG1Q13488 830 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 TDRD12Q587J7 1177 aaKnown RBP11.05□□□□□ -0.64
UFD1-205ENST00000459854 CFAP58Q5T655 872 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
UFD1-205ENST00000459854 CLEC4GQ6UXB4 293 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 LMO7Q8WWI1 1683 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 FERP16591 822 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 GRM8O00222 908 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
UFD1-205ENST00000459854 IFIT5Q13325 482 aaKnown RBP11.05□□□□□ -0.64
UFD1-205ENST00000459854 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
UFD1-205ENST00000459854 TMX3Q96JJ7 454 aa11.05□□□□□ -0.64
UFD1-205ENST00000459854 C8orf34Q49A92 452 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 RAD21O60216 631 aa11.04□□□□□ -0.64
UFD1-205ENST00000459854 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
UFD1-205ENST00000459854 MTIF2P46199 727 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms