RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PTPRCP08575 1304 aa17.94■□□□□ 0.46
LYSMD3-202ENST00000453259 NOL9Q5SY16 702 aaKnown RBP17.93■□□□□ 0.46
LYSMD3-202ENST00000453259 SH3TC2Q8TF17 1288 aa17.93■□□□□ 0.46
LYSMD3-202ENST00000453259 ZNF112Q9UJU3 913 aa17.93■□□□□ 0.46
LYSMD3-202ENST00000453259 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
LYSMD3-202ENST00000453259 ZBTB22O15209 634 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 CACNB3P54284 484 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 ANKRD44Q8N8A2 993 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 PARK7Q99497 189 aaKnown RBP17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 HTATIP2Q9BUP3 242 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 ADGRA2Q96PE1 1338 aa17.92■□□□□ 0.46
LYSMD3-202ENST00000453259 H0YGN5 161 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 FGFR2P21802 821 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 GRK4P32298 578 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 PSMC4P43686 418 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 BCAMP50895 628 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 TRIM47Q96LD4 638 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 FBXO3Q9UK99 471 aa17.91■□□□□ 0.46
LYSMD3-202ENST00000453259 PDHXO00330 501 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 CXCL11O14625 94 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 GJB1P08034 283 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 SLC5A1P13866 664 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 GJA8P48165 433 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 RAET1EQ8TD07 263 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 LPIN2Q92539 896 aa17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
LYSMD3-202ENST00000453259 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
LYSMD3-202ENST00000453259 UBXN2AP68543 259 aa17.89■□□□□ 0.45
LYSMD3-202ENST00000453259 SLAIN1Q8ND83 568 aa17.89■□□□□ 0.45
LYSMD3-202ENST00000453259 CEP290O15078 2479 aa17.89■□□□□ 0.45
LYSMD3-202ENST00000453259 SEMA3EO15041 775 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 FMNL1O95466 1100 aaPredicted RBP17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 OSBPP22059 807 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 INPP5BP32019 993 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 FCGRTP55899 365 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 SHISA4Q96DD7 197 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 GNL3LQ9NVN8 582 aaKnown RBP17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 CPA4Q9UI42 421 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 MYPNQ86TC9 1320 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 SALL1Q9NSC2 1324 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 MYH13Q9UKX3 1938 aa17.88■□□□□ 0.45
LYSMD3-202ENST00000453259 ZSWIM8A7E2V4 1837 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 EYA2O00167 538 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 ANP32CO43423 234 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 MIGA2Q7L4E1 593 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 FASTKD5Q7L8L6 764 aaKnown RBP17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 DAGLAQ9Y4D2 1042 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 NR2E3Q9Y5X4 410 aa17.87■□□□□ 0.45
LYSMD3-202ENST00000453259 A0A1W2PPC1 479 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 BCRP11274 1271 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 MOGSQ13724 837 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 DPF3Q92784 378 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
LYSMD3-202ENST00000453259 MYCP01106 439 aaPredicted RBP17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 LDHBP07195 334 aaKnown RBP17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 CCL5P13501 91 aa17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 MTFR1Q15390 333 aa17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 ZGPATQ8N5A5 531 aaKnown RBP17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
LYSMD3-202ENST00000453259 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 ENTPD3O75355 529 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 CIAO1O76071 339 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 CTGFP29279 349 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 MRPL50Q8N5N7 158 aaKnown RBP17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 PXYLP1Q8TE99 480 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 IDI2Q9BXS1 227 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 RNF208Q9H0X6 261 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 PICK1Q9NRD5 415 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
LYSMD3-202ENST00000453259 ATRNL1Q5VV63 1379 aa17.83■□□□□ 0.45
LYSMD3-202ENST00000453259 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 TCP10Q12799 353 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 IRF5Q13568 498 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 SLF2Q8IX21 1173 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 SCYL3Q8IZE3 742 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 BIN2Q9UBW5 565 aaPredicted RBP17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 FAM198AQ9UFP1 575 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 DENND2AQ9ULE3 1009 aa17.83■□□□□ 0.44
LYSMD3-202ENST00000453259 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 MAP3K10Q02779 954 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 PRKCZQ05513 592 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 NFIAQ12857 509 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 GPAT2Q6NUI2 795 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 U2AF1L4Q8WU68 220 aaKnown RBP17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 DOCK2Q92608 1830 aa17.82■□□□□ 0.44
LYSMD3-202ENST00000453259 PHF20L1A8MW92 1017 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms