RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CCSER2Q9H7U1 834 aa7.99□□□□□ -1.13
HMGB1P26-201ENST00000452520 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
HMGB1P26-201ENST00000452520 GREM1O60565 184 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 TRIM37O94972 964 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 GARTP22102 1010 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 COL8A1P27658 744 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 PTPN11Q06124 597 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 SPON2Q9BUD6 331 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 MIR1-1HGQ9H1L0 117 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 KRT82Q9NSB4 513 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 FAM181BA6NEQ2 426 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 WISP1O95388 367 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 SPATA31C1P0DKV0 1188 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 EXOSC6Q5RKV6 272 aaKnown RBP7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 GOLM1Q8NBJ4 401 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 MEGF11A6BM72 1044 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZNF862O60290 1169 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 TNNI2P48788 182 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SEPT6Q14141 434 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIAA1211Q6ZU35 1233 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIAA0825Q8IV33 1275 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 GPBAR1Q8TDU6 330 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 C8orf37Q96NL8 207 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SUPT16HQ9Y5B9 1047 aaKnown RBP7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 FAM221AA4D161 298 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 F13A1P00488 732 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 SELPP16109 830 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 LIG1P18858 919 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 PAK2Q13177 524 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 BNC2Q6ZN30 1099 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 GATAD2BQ8WXI9 593 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 GAL3ST3Q96A11 431 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 LENG1Q96BZ8 264 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 AOC2O75106 756 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 NAALADL2Q58DX5 795 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ACSBG1Q96GR2 724 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 RUSC1Q9BVN2 902 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 NT5C1AQ9BXI3 368 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ROBO2Q9HCK4 1378 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 C9orf172C9J069 976 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 CILPO75339 1184 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 GJA8P48165 433 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 NUTM2GQ5VZR2 741 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SLC43A3Q8NBI5 491 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 RAD18Q9NS91 495 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 UBP1Q9NZI7 540 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 PCDHA4Q9UN74 947 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SYNGAP1Q96PV0 1343 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 HNRNPUQ00839 825 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 SMG8Q8ND04 991 aaKnown RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 SUGCTQ9HAC7 445 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 USP21Q9UK80 565 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 ALX3O95076 343 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 APBA3O96018 575 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 CRKP46108 304 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 INPP5AQ14642 412 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZC3H12AQ5D1E8 599 aaKnown RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 DIEXFQ68CQ4 756 aaKnown RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 FBXO27Q8NI29 283 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 NACC1Q96RE7 527 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 AKTIPQ9H8T0 292 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 GFRA2O00451 464 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 CDK8P49336 464 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 RPL6Q02878 288 aaKnown RBP7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 MPP2Q14168 576 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 VPS37DQ86XT2 251 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms