RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FOXR1Q6PIV2 292 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 NLRP13Q86W25 1043 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 GAS2L3Q86XJ1 694 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 NLGN1Q8N2Q7 840 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 ANKRD24Q8TF21 1146 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 ACDQ96AP0 544 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 SCARF2Q96GP6 870 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 SGSM3Q96HU1 749 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 GMCL1Q96IK5 515 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 FAM210AQ96ND0 272 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 SPON2Q9BUD6 331 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 TIMMDC1Q9NPL8 285 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 ABI2Q9NYB9 513 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 ADAMTS1Q9UHI8 967 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 MORC2Q9Y6X9 1032 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 POLA1P09884 1462 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 A0A1B0GTH6 734 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 A0A1W2PNR3 127 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 A0A1W2PP55 124 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 H7C1W4 665 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CES1P23141 567 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 SERINC3Q13530 473 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CCDC96Q2M329 555 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 SKOR2Q2VWA4 1001 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CCDC184Q52MB2 194 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZC3H12AQ5D1E8 599 aaKnown RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 ARSJQ5FYB0 599 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 PEAR1Q5VY43 1037 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 KANK3Q6NY19 840 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 TSHZ1Q6ZSZ6 1077 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 JAZF1Q86VZ6 243 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 RELL1Q8IUW5 271 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 KIAA0825Q8IV33 1275 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 PDCL2Q8N4E4 241 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 JMYQ8N9B5 988 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CEP63Q96MT8 703 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 PANK3Q9H999 370 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 ATG3Q9NT62 314 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 TRAK1Q9UPV9 953 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 CNTNAP5Q8WYK1 1306 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 DHX29Q7Z478 1369 aaKnown RBP4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 SPATA31E1Q6ZUB1 1445 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 ARAP1Q96P48 1450 aa4.37□□□□□ -1.71
HMGB3P8-201ENST00000449709 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 COQ9O75208 318 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 REC8O95072 547 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 F11P03951 625 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 THBS1P07996 1170 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 BCRP11274 1271 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 MSNP26038 577 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 SSR1P43307 286 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF445P59923 1031 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CBX1P83916 185 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 TRDNQ13061 729 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 PWP1Q13610 501 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 BMS1Q14692 1282 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CCDC85BQ15834 202 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 NFE2L2Q16236 605 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 TTC39BQ5VTQ0 682 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CKAP2LQ8IYA6 745 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 MNS1Q8NEH6 495 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 EXOC6Q8TAG9 804 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CHMP4CQ96CF2 233 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 EAF1Q96JC9 268 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 TMEM74Q96NL1 305 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 TRERF1Q96PN7 1200 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 SLC26A8Q96RN1 970 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 TRIM56Q9BRZ2 755 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 NUCKS1Q9H1E3 243 aaKnown RBP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 EHD4Q9H223 541 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 GPAMQ9HCL2 828 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 KCNQ5Q9NR82 932 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 ENAMQ9NRM1 1142 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 SPTLC3Q9NUV7 552 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 SALL4Q9UJQ4 1053 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 SOGA1O94964 1423 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CLASP1Q7Z460 1538 aa4.36□□□□□ -1.71
HMGB3P8-201ENST00000449709 CFAP43Q8NDM7 1665 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 TMEM238LA0A1B0GVL6 79 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 GOLIM4O00461 696 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 PPP1R12AO14974 1030 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CYP2E1P05181 493 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 SSBP05455 408 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 NEFHP12036 1026 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 XRCC5P13010 732 aaKnown RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 EDN3P14138 238 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 MX2P20592 715 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CYP2C19P33261 490 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 EIF4A3P38919 411 aaKnown RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 SOX9P48436 509 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 NASPP49321 788 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 FCGRTP55899 365 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 KCNQ4P56696 695 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 INHBEP58166 350 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms