RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RBSNQ9H1K0 784 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 MAGEB6P1A0A0J9YX57 407 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 PDS5AQ29RF7 1337 aaKnown RBP20.49■□□□□ 0.87
SMC6-206ENST00000446852 TFIP11Q9UBB9 837 aaKnown RBP20.49■□□□□ 0.87
SMC6-206ENST00000446852 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 ELP1O95163 1332 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 PROM2Q8N271 834 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
SMC6-206ENST00000446852 NASPP49321 788 aaPredicted RBP20.48■□□□□ 0.87
SMC6-206ENST00000446852 IGDCC4Q8TDY8 1250 aa20.48■□□□□ 0.87
SMC6-206ENST00000446852 KDM4AO75164 1064 aa20.48■□□□□ 0.87
SMC6-206ENST00000446852 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
SMC6-206ENST00000446852 KIAA1551Q9HCM1 1747 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 DYNLL1P63167 89 aaKnown RBP20.47■□□□□ 0.87
SMC6-206ENST00000446852 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 TMEM87BQ96K49 555 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 ZSWIM5Q9P217 1185 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 SERPINB2P05120 415 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
SMC6-206ENST00000446852 SCAND2PQ9GZW5 306 aaPredicted RBP20.47■□□□□ 0.87
SMC6-206ENST00000446852 LY9Q9HBG7 655 aa20.47■□□□□ 0.87
SMC6-206ENST00000446852 MYH2Q9UKX2 1941 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
SMC6-206ENST00000446852 TXNRD1Q16881 649 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 CRY2Q49AN0 593 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 CCDC183Q5T5S1 534 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
SMC6-206ENST00000446852 CNNM2Q9H8M5 875 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 ANKIB1Q9P2G1 1089 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 GUCY1B3Q02153 619 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 MECOMQ03112 1051 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 CHAF1AQ13111 956 aaPredicted RBP20.46■□□□□ 0.87
SMC6-206ENST00000446852 SPATA32Q96LK8 384 aa20.46■□□□□ 0.87
SMC6-206ENST00000446852 DDR1Q08345 913 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 SMIM22K7EJ46 135 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 RXRAP19793 462 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 PRDX5P30044 214 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 PPARAQ07869 468 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 SGMS1Q86VZ5 419 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 STK11IPQ8N1F8 1099 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 KRT23Q9C075 422 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
SMC6-206ENST00000446852 ADD1P35611 737 aaKnown RBP20.44■□□□□ 0.86
SMC6-206ENST00000446852 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
SMC6-206ENST00000446852 LAMB1P07942 1786 aa20.44■□□□□ 0.86
SMC6-206ENST00000446852 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
SMC6-206ENST00000446852 CPLX1O14810 134 aa20.44■□□□□ 0.86
SMC6-206ENST00000446852 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMC6-206ENST00000446852 ST5P78524 1137 aa20.44■□□□□ 0.86
SMC6-206ENST00000446852 XDHP47989 1333 aa20.43■□□□□ 0.86
SMC6-206ENST00000446852 RRP12Q5JTH9 1297 aaKnown RBP20.43■□□□□ 0.86
SMC6-206ENST00000446852 ILDR1Q86SU0 546 aaPredicted RBP20.43■□□□□ 0.86
SMC6-206ENST00000446852 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
SMC6-206ENST00000446852 ORC3Q9UBD5 711 aaPredicted RBP20.43■□□□□ 0.86
SMC6-206ENST00000446852 LEMD3Q9Y2U8 911 aa20.43■□□□□ 0.86
SMC6-206ENST00000446852 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
SMC6-206ENST00000446852 IFIT3O14879 490 aaKnown RBP20.43■□□□□ 0.86
SMC6-206ENST00000446852 LIFRP42702 1097 aa20.43■□□□□ 0.86
SMC6-206ENST00000446852 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 POLRMTO00411 1230 aaKnown RBP20.42■□□□□ 0.86
SMC6-206ENST00000446852 CDC27P30260 824 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 OTUD7BQ6GQQ9 843 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
SMC6-206ENST00000446852 MYL10Q9BUA6 226 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 TOMM22Q9NS69 142 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 ANAPC4Q9UJX5 808 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 ZBTB22O15209 634 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 ZKSCAN3Q9BRR0 538 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
SMC6-206ENST00000446852 ZBTB43O43298 467 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 RBM6P78332 1123 aaKnown RBP20.41■□□□□ 0.86
SMC6-206ENST00000446852 CCDC144CPQ8IYA2 1237 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMC6-206ENST00000446852 GJB4Q9NTQ9 266 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 CYP2D7A0A087X1C5 515 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 LIG1P18858 919 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 GPSM2P81274 684 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 PGBD1Q96JS3 809 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 C8orf76Q96K31 380 aa20.41■□□□□ 0.86
SMC6-206ENST00000446852 RNF41Q9H4P4 317 aaPredicted RBP20.41■□□□□ 0.86
SMC6-206ENST00000446852 FAM217BQ9NTX9 383 aaPredicted RBP20.41■□□□□ 0.86
SMC6-206ENST00000446852 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
SMC6-206ENST00000446852 FBXO18Q8NFZ0 1043 aa20.4■□□□□ 0.86
SMC6-206ENST00000446852 AATFQ9NY61 560 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMC6-206ENST00000446852 CFAP45Q9UL16 551 aa20.4■□□□□ 0.86
SMC6-206ENST00000446852 LRRC37AA6NMS7 1700 aa20.4■□□□□ 0.86
SMC6-206ENST00000446852 LTBP1Q14766 1721 aa20.39■□□□□ 0.86
SMC6-206ENST00000446852 CEBPZQ03701 1054 aaKnown RBP20.39■□□□□ 0.85
SMC6-206ENST00000446852 NTRK3Q16288 839 aa20.39■□□□□ 0.85
SMC6-206ENST00000446852 TDRD7Q8NHU6 1098 aaKnown RBP20.39■□□□□ 0.85
SMC6-206ENST00000446852 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 RNF214Q8ND24 703 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms