RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SIGLEC1Q9BZZ2 1709 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 MYO5BQ9ULV0 1848 aa16.27■□□□□ 0.2
SMARCA4-204ENST00000444061 C6orf50Q9HD87 102 aa16.27■□□□□ 0.2
SMARCA4-204ENST00000444061 TRAK2O60296 914 aa16.27■□□□□ 0.2
SMARCA4-204ENST00000444061 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.19
SMARCA4-204ENST00000444061 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.19
SMARCA4-204ENST00000444061 MINPP1Q9UNW1 487 aa16.27■□□□□ 0.19
SMARCA4-204ENST00000444061 SAMM50Q9Y512 469 aa16.27■□□□□ 0.19
SMARCA4-204ENST00000444061 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-204ENST00000444061 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 GPCPD1Q9NPB8 672 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 CLRN2A0PK11 232 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 SLC27A2O14975 620 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 STX6O43752 255 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 SPDYE3A6NKU9 549 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 CALML3P27482 149 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 CHRNA5P30532 468 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 TLR7Q9NYK1 1049 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-204ENST00000444061 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 OFD1O75665 1012 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 RXRAP19793 462 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 SLC1A4P43007 532 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 TFAP4Q01664 338 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 SDR42E1Q8WUS8 393 aa16.25■□□□□ 0.19
SMARCA4-204ENST00000444061 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 PPARAQ07869 468 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 TRMT1LQ7Z2T5 733 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 AK2P54819 239 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 FILIP1LQ4L180 1135 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 MATR3P43243 847 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■■■■ 30.1
SMARCA4-204ENST00000444061 POLA2Q14181 598 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 IFNL3Q8IZI9 196 aa16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-204ENST00000444061 ADCY9O60503 1353 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 SMC2O95347 1197 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 PODNQ7Z5L7 613 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 GNA11P29992 359 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 UBA7P41226 1012 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 IRX3P78415 501 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 IVNS1ABPQ9Y6Y0 642 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
SMARCA4-204ENST00000444061 SASH1O94885 1247 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 CALML4Q96GE6 196 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 NUP62CLQ9H1M0 184 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 MTX1Q13505 466 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 SEC62Q99442 399 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 ATP8A2Q9NTI2 1148 aa16.22■□□□□ 0.19
SMARCA4-204ENST00000444061 USP17L8P0C7I0 530 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 RPS6KB1P23443 525 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 PDE4CQ08493 712 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 ZNF277Q9NRM2 450 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 PI16Q6UXB8 463 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 CPA1P15085 419 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.19
SMARCA4-204ENST00000444061 BMP15O95972 392 aa16.21■□□□□ 0.18
SMARCA4-204ENST00000444061 RASGRF1Q13972 1273 aa16.21■□□□□ 0.18
SMARCA4-204ENST00000444061 AOC3Q16853 763 aa16.21■□□□□ 0.18
SMARCA4-204ENST00000444061 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.18
SMARCA4-204ENST00000444061 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 326 ms