RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 C6orf15Q6UXA7 325 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 RIPOR1Q6ZS17 1223 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 CERS3Q8IU89 383 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 POP1Q99575 1024 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 POLR3KQ9Y2Y1 108 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 PTCH2Q9Y6C5 1203 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 LOC102724428A0A0B4J2F2 783 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 GRIN3BO60391 1043 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 BPNT1O95861 308 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 S100BP04271 92 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 IMPDH2P12268 514 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 NME2P22392 152 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 SIK1P57059 783 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 LAMC2Q13753 1193 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 DALRD3Q5D0E6 543 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 ADAMTSL4Q6UY14 1074 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 TMX1Q9H3N1 280 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 ANTXR1Q9H6X2 564 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 SAMM50Q9Y512 469 aa5.62□□□□□ -1.51
CDC42BPA-207ENST00000441725 ASMTLO95671 621 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 PDGFRBP09619 1106 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 CD33P20138 364 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 GPLD1P80108 840 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 ZNF423Q2M1K9 1284 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 CCDC181Q5TID7 509 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 LLGL2Q6P1M3 1020 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 MPRIPQ6WCQ1 1025 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 SULF2Q8IWU5 870 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 EFCC1Q9HA90 598 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 CBX8Q9HC52 389 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 CD2APQ9Y5K6 639 aa5.61□□□□□ -1.51
CDC42BPA-207ENST00000441725 B3GALT4O96024 378 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 VIL1P09327 827 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 TCEA2Q15560 299 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 BSNDQ8WZ55 320 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 ABHD17AQ96GS6 310 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 NDFIP2Q9NV92 336 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 ZMYM5Q9UJ78 669 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 FAN1Q9Y2M0 1017 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 A0A1W2PQH9 124 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 SOBPA7XYQ1 873 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 RPL6Q02878 288 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 PCDH1Q08174 1060 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 SSRP1Q08945 709 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 NUCKS1Q9H1E3 243 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-207ENST00000441725 MAN1A2O60476 641 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 TREML4Q6UXN2 200 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 VN1R5Q7Z5H4 357 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 FAM178BQ8IXR5 827 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 FAM126AQ9BYI3 521 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 IGFLR1Q9H665 355 aa5.59□□□□□ -1.51
CDC42BPA-207ENST00000441725 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 ATE1O95260 518 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 CDK8P49336 464 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZNF252P-AS1Q0IIN9 211 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 LRRC14Q15048 493 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 CEP135Q66GS9 1140 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 C19orf47Q8N9M1 422 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 ST13P5Q8NFI4 369 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 IER2Q9BTL4 223 aa5.59□□□□□ -1.52
CDC42BPA-207ENST00000441725 GHRHP01286 108 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 ARNTP27540 789 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 EVA1CP58658 441 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 HSP90AB2PQ58FF8 381 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 PDZD3Q86UT5 571 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 JAMLQ86YT9 394 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 JDP2Q8WYK2 163 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 TYW1Q9NV66 732 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 NXF1Q9UBU9 619 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 SOX13Q9UN79 622 aa5.58□□□□□ -1.52
CDC42BPA-207ENST00000441725 WFS1O76024 890 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 EIF2AK2P19525 551 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 GUCY2CP25092 1073 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 IRX6P78412 446 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 DBN1Q16643 649 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 ODR4Q5SWX8 454 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 FERMT3Q86UX7 667 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 NPAS3Q8IXF0 933 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 PKNOX2Q96KN3 472 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 SMNDC1O75940 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 SELPP16109 830 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 CDKN1CP49918 316 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 ZYXQ15942 572 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 MAP1SQ66K74 1059 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 TM9SF2Q99805 663 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 PLAAQ9Y263 795 aa5.57□□□□□ -1.52
CDC42BPA-207ENST00000441725 MEIS3P2A8K0S8 358 aa5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 MAP4K4O95819 1239 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-207ENST00000441725 FAM153BP0C7A2 387 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms