RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 ZBTB43O43298 467 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 NR1I2O75469 434 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 ME1P48163 572 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 TBC1D9BQ66K14 1250 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 OTUD7BQ6GQQ9 843 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 RBM43Q6ZSC3 357 aaKnown RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 BSDC1Q9NW68 430 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 RTEL1Q9NZ71 1219 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 NARFQ9UHQ1 456 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 IQSEC3Q9UPP2 1182 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-218ENST00000439806 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
CPNE1-218ENST00000439806 LAMB1P07942 1786 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 MAGEB6P1A0A0J9YX57 407 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 ERICH2A1L162 156 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 PRKAB2O43741 272 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 ZNF500O60304 480 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-218ENST00000439806 KINO60870 393 aaKnown RBP12.15□□□□□ -0.46
CPNE1-218ENST00000439806 ZPR1O75312 459 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 GYG1P46976 350 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 KCNQ4P56696 695 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
CPNE1-218ENST00000439806 TRIM29Q14134 588 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
CPNE1-218ENST00000439806 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.465e-10■□□□□ 9.7
CPNE1-218ENST00000439806 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 USP21Q9UK80 565 aa12.15□□□□□ -0.46
CPNE1-218ENST00000439806 BAZ2AQ9UIF9 1905 aaKnown RBP12.15□□□□□ -0.46
CPNE1-218ENST00000439806 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 GNPATO15228 680 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 YEATS4O95619 227 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 LIFRP42702 1097 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 ANO6Q4KMQ2 910 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 SGMS1Q86VZ5 419 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
CPNE1-218ENST00000439806 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
CPNE1-218ENST00000439806 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 SEMA3EO15041 775 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 NPHP1O15259 732 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 CAVIN2O95810 425 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 TPM3P06753 285 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 RXRAP19793 462 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-218ENST00000439806 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 PPARAQ07869 468 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
CPNE1-218ENST00000439806 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 WTAPQ15007 396 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 STX1AQ16623 288 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 WASF1Q92558 559 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 CELF1Q92879 486 aaKnown RBP12.13□□□□□ -0.47
CPNE1-218ENST00000439806 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 ANKRD2Q9GZV1 360 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
CPNE1-218ENST00000439806 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
CPNE1-218ENST00000439806 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
CPNE1-218ENST00000439806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.472e-10■□□□□ 8.4
CPNE1-218ENST00000439806 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 KIAA1551Q9HCM1 1747 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
CPNE1-218ENST00000439806 SPTLC2O15270 562 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms