RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 LPXNO60711 386 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 PSMD6Q15008 389 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 FAM47CQ5HY64 1035 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 FAM89AQ96GI7 184 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 ARFGAP3Q9NP61 516 aa15.47■□□□□ 0.07
LRCH3-206ENST00000438796 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
LRCH3-206ENST00000438796 NAA25Q14CX7 972 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 RPUSD2Q8IZ73 545 aaKnown RBP15.46■□□□□ 0.07
LRCH3-206ENST00000438796 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 B4E1Z4 1266 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 KRT86O43790 486 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 KRT83P78385 493 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 BMP2KLQ5H9B9 411 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 SEPT14Q6ZU15 432 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 PAXBP1Q9Y5B6 917 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 IFNKQ9P0W0 207 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 AFG3L2Q9Y4W6 797 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 KIFAP3Q92845 792 aa15.46■□□□□ 0.07
LRCH3-206ENST00000438796 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.06
LRCH3-206ENST00000438796 CNGA1P29973 690 aa15.46■□□□□ 0.06
LRCH3-206ENST00000438796 IFRD2Q12894 506 aaPredicted RBP15.46■□□□□ 0.06
LRCH3-206ENST00000438796 LARGE2Q8N3Y3 721 aa15.46■□□□□ 0.06
LRCH3-206ENST00000438796 VPS18Q9P253 973 aa15.46■□□□□ 0.06
LRCH3-206ENST00000438796 DISP3Q9P2K9 1392 aa15.46■□□□□ 0.06
LRCH3-206ENST00000438796 NOL3O60936 208 aaKnown RBP15.45■□□□□ 0.06
LRCH3-206ENST00000438796 SMTNP53814 917 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 TNRQ92752 1358 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 OPA1O60313 960 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 TAF5LO75529 589 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 PIK3AP1Q6ZUJ8 805 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 CPLX4Q7Z7G2 160 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 TBC1D31Q96DN5 1066 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 BRDTQ58F21 947 aaPredicted RBP15.45■□□□□ 0.06
LRCH3-206ENST00000438796 TXKP42681 527 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 TNFAIP3P21580 790 aa15.45■□□□□ 0.06
LRCH3-206ENST00000438796 MTHFSDQ2M296 383 aaKnown RBP15.45■□□□□ 0.06
LRCH3-206ENST00000438796 VPS16Q9H269 839 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 FAM200AQ8TCP9 573 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 ZNF594Q96JF6 807 aaPredicted RBP15.44■□□□□ 0.06
LRCH3-206ENST00000438796 FAM98CQ17RN3 349 aaKnown RBP15.44■□□□□ 0.06
LRCH3-206ENST00000438796 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 METTL13Q8N6R0 699 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 NOC4LQ9BVI4 516 aaKnown RBP15.44■□□□□ 0.06
LRCH3-206ENST00000438796 F13A1P00488 732 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 AK2P54819 239 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
LRCH3-206ENST00000438796 A0A1B0GVL5 298 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 H0YIN7 160 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 ITIH3Q06033 890 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 PAGR1Q9BTK6 254 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
LRCH3-206ENST00000438796 MKRN1Q9UHC7 482 aaKnown RBP15.43■□□□□ 0.06
LRCH3-206ENST00000438796 M0QZ92 97 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 PDE4DQ08499 809 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
LRCH3-206ENST00000438796 GPR162Q16538 588 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 GSDMBQ8TAX9 411 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 CPA1P15085 419 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 SPAG1Q07617 926 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 ARHGEF35A5YM69 484 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 ITGA6P23229 1130 aa15.43■□□□□ 0.06
LRCH3-206ENST00000438796 MTRF1LQ9UGC7 380 aaKnown RBP15.43■□□□□ 0.06
LRCH3-206ENST00000438796 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 C4orf50Q6ZRC1 276 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 ATP8B2P98198 1209 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 TRIM31Q9BZY9 425 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 HIBADHP31937 336 aaKnown RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 SMCR8Q8TEV9 937 aaPredicted RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 MED10Q9BTT4 135 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 DTNBO60941 627 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 TIMM10P62072 90 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 DENND2AQ9ULE3 1009 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 SPDYE16A6NNV3 312 aaPredicted RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 RPL13P26373 211 aaKnown RBP15.42■□□□□ 0.06
LRCH3-206ENST00000438796 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 TYRO3Q06418 890 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 BSPRYQ5W0U4 402 aa15.42■□□□□ 0.06
LRCH3-206ENST00000438796 FMNL3Q8IVF7 1028 aa15.41■□□□□ 0.06
LRCH3-206ENST00000438796 TTC14Q96N46 770 aa15.41■□□□□ 0.06
LRCH3-206ENST00000438796 PRPF6O94906 941 aaKnown RBP15.41■□□□□ 0.06
LRCH3-206ENST00000438796 CALCOCO2Q13137 446 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms