RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FAM98CQ17RN3 349 aaKnown RBP13.16□□□□□ -0.3
PTCH1-208ENST00000430669 ADCY9O60503 1353 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 USP37Q86T82 979 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 UBASH3AP57075 661 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 CRB1P82279 1406 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 B4DLN1 442 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
PTCH1-208ENST00000430669 TAF4BQ92750 862 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 DTHD1Q6ZMT9 781 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
PTCH1-208ENST00000430669 PSMA7O14818 248 aa13.15□□□□□ -0.31
PTCH1-208ENST00000430669 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.31
PTCH1-208ENST00000430669 PDE6BP35913 854 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
PTCH1-208ENST00000430669 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 MTIF2P46199 727 aaKnown RBP13.14□□□□□ -0.31
PTCH1-208ENST00000430669 POLD1P28340 1107 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 CETN2P41208 172 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-208ENST00000430669 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 PDE4CQ08493 712 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-208ENST00000430669 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 C1orf167Q5SNV9 1468 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 UBXN4Q92575 508 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
PTCH1-208ENST00000430669 POLA2Q14181 598 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 TBCAO75347 108 aaKnown RBP13.13□□□□□ -0.31
PTCH1-208ENST00000430669 UFL1O94874 794 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 ZNF445P59923 1031 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 CCDC66A2RUB6 948 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 E7EWF7 191 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
PTCH1-208ENST00000430669 TEX11Q8IYF3 940 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 SIK1P57059 783 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
PTCH1-208ENST00000430669 HELBQ8NG08 1087 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-208ENST00000430669 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
PTCH1-208ENST00000430669 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-208ENST00000430669 KCNQ3O43525 872 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
PTCH1-208ENST00000430669 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
PTCH1-208ENST00000430669 PLCD1P51178 756 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 H0YIN7 160 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 UBE3CQ15386 1083 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 TRIM47Q96LD4 638 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 CUTAO60888 179 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 PICALMQ13492 652 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
PTCH1-208ENST00000430669 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-208ENST00000430669 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
PTCH1-208ENST00000430669 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 BIN1O00499 593 aa13.11□□□□□ -0.31
PTCH1-208ENST00000430669 B4E1Z4 1266 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 PDE8BO95263 885 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 ARMT1Q9H993 441 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 TNNT1P13805 278 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 TTLL7Q6ZT98 887 aa13.1□□□□□ -0.31
PTCH1-208ENST00000430669 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
PTCH1-208ENST00000430669 CCDC40Q4G0X9 1142 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 MYH3P11055 1940 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms