RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MAST3O60307 1309 aa21.26■□□□□ 0.99
CPSF4-203ENST00000430038 ALDH1A1P00352 501 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 RASGRF1Q13972 1273 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 MIGA2Q7L4E1 593 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 FAM198AQ9UFP1 575 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 SALL1Q9NSC2 1324 aa21.25■□□□□ 0.99
CPSF4-203ENST00000430038 A0A1B0GUL7 405 aa21.24■□□□□ 0.99
CPSF4-203ENST00000430038 TCP10Q12799 353 aa21.24■□□□□ 0.99
CPSF4-203ENST00000430038 ZNF384Q8TF68 577 aa21.24■□□□□ 0.99
CPSF4-203ENST00000430038 XAGE2Q96GT9 111 aa21.24■□□□□ 0.99
CPSF4-203ENST00000430038 ZBTB22O15209 634 aa21.23■□□□□ 0.99
CPSF4-203ENST00000430038 IPO8O15397 1037 aaKnown RBP21.23■□□□□ 0.99
CPSF4-203ENST00000430038 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
CPSF4-203ENST00000430038 SLURP2P0DP57 97 aa21.23■□□□□ 0.99
CPSF4-203ENST00000430038 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
CPSF4-203ENST00000430038 FAM151AQ8WW52 585 aa21.23■□□□□ 0.99
CPSF4-203ENST00000430038 OTUD5Q96G74 571 aa21.23■□□□□ 0.99
CPSF4-203ENST00000430038 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
CPSF4-203ENST00000430038 INPP5BP32019 993 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 PKN2Q16513 984 aaKnown RBP21.22■□□□□ 0.99
CPSF4-203ENST00000430038 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
CPSF4-203ENST00000430038 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 WRNIP1Q96S55 665 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 USP40Q9NVE5 1235 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 GNL3LQ9NVN8 582 aaKnown RBP21.22■□□□□ 0.99
CPSF4-203ENST00000430038 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 ZSWIM8A7E2V4 1837 aa21.22■□□□□ 0.99
CPSF4-203ENST00000430038 SPDYE5A6NIY4 337 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 SEMA3EO15041 775 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 GNAI2P04899 355 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 RLBP1P12271 317 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 OTOP1Q7RTM1 612 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 CD99L2Q8TCZ2 262 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 TMOD2Q9NZR1 351 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 RPAP1Q9BWH6 1393 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-203ENST00000430038 PDE4DIPQ5VU43 2346 aa21.21■□□□□ 0.99
CPSF4-203ENST00000430038 CCL15-CCL14A0A0B4J2E2 113 aa21.2■□□□□ 0.98
CPSF4-203ENST00000430038 IRF6O14896 467 aa21.2■□□□□ 0.98
CPSF4-203ENST00000430038 CCL15Q16663 113 aa21.2■□□□□ 0.98
CPSF4-203ENST00000430038 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
CPSF4-203ENST00000430038 SH3BP5LQ7L8J4 393 aa21.2■□□□□ 0.98
CPSF4-203ENST00000430038 CSADQ9Y600 493 aa21.2■□□□□ 0.98
CPSF4-203ENST00000430038 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
CPSF4-203ENST00000430038 ZNF112Q9UJU3 913 aa21.19■□□□□ 0.98
CPSF4-203ENST00000430038 TRIM17Q9Y577 477 aa21.19■□□□□ 0.98
CPSF4-203ENST00000430038 BRCA2P51587 3418 aa21.19■□□□□ 0.98
CPSF4-203ENST00000430038 GAKO14976 1311 aa21.19■□□□□ 0.98
CPSF4-203ENST00000430038 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 TBC1D9Q6ZT07 1266 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 NEUROD6Q96NK8 337 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 C1orf115Q9H7X2 142 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 DDX4Q9NQI0 724 aaKnown RBP21.18■□□□□ 0.98
CPSF4-203ENST00000430038 HMG20BQ9P0W2 317 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 ABCF2Q9UG63 623 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 RFX7Q2KHR2 1363 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 ATRNL1Q5VV63 1379 aa21.18■□□□□ 0.98
CPSF4-203ENST00000430038 GTF2A2P52657 109 aa21.17■□□□□ 0.98
CPSF4-203ENST00000430038 POLA2Q14181 598 aa21.17■□□□□ 0.98
CPSF4-203ENST00000430038 ZNF341Q9BYN7 854 aa21.17■□□□□ 0.98
CPSF4-203ENST00000430038 DOCK2Q92608 1830 aa21.17■□□□□ 0.98
CPSF4-203ENST00000430038 PDS5AQ29RF7 1337 aaKnown RBP21.16■□□□□ 0.98
CPSF4-203ENST00000430038 BTBD19C9JJ37 291 aa21.16■□□□□ 0.98
CPSF4-203ENST00000430038 WDHD1O75717 1129 aaPredicted RBP21.16■□□□□ 0.98
CPSF4-203ENST00000430038 RGS3P49796 1198 aa21.16■□□□□ 0.98
CPSF4-203ENST00000430038 MECOMQ03112 1051 aa21.16■□□□□ 0.98
CPSF4-203ENST00000430038 OTUD7BQ6GQQ9 843 aa21.16■□□□□ 0.98
CPSF4-203ENST00000430038 FAM163AQ96GL9 167 aaPredicted RBP21.16■□□□□ 0.98
CPSF4-203ENST00000430038 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
CPSF4-203ENST00000430038 MKI67P46013 3256 aaKnown RBP21.16■□□□□ 0.98
CPSF4-203ENST00000430038 KIAA0100Q14667 2235 aaKnown RBP21.15■□□□□ 0.98
CPSF4-203ENST00000430038 DDTLA6NHG4 134 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-203ENST00000430038 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
CPSF4-203ENST00000430038 SP3Q02447 781 aa21.15■□□□□ 0.98
CPSF4-203ENST00000430038 MOGSQ13724 837 aa21.15■□□□□ 0.98
CPSF4-203ENST00000430038 TAF1CQ15572 869 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-203ENST00000430038 DCAF15Q66K64 600 aa21.15■□□□□ 0.98
CPSF4-203ENST00000430038 IDI2Q9BXS1 227 aa21.15■□□□□ 0.98
CPSF4-203ENST00000430038 PHF20L1A8MW92 1017 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 ZBTB7BO15156 539 aaPredicted RBP21.14■□□□□ 0.97
CPSF4-203ENST00000430038 MCAMP43121 646 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 RHBDL3P58872 404 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 PPIL2Q13356 520 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 MVPQ14764 893 aaKnown RBP21.14■□□□□ 0.97
CPSF4-203ENST00000430038 SSH3Q8TE77 659 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 PTPN22Q9Y2R2 807 aa21.14■□□□□ 0.97
CPSF4-203ENST00000430038 PHIPQ8WWQ0 1821 aa21.13■□□□□ 0.97
CPSF4-203ENST00000430038 ARID4AP29374 1257 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-203ENST00000430038 BTDP43251 543 aa21.13■□□□□ 0.97
CPSF4-203ENST00000430038 G3BP1Q13283 466 aaKnown RBP eCLIP21.13■□□□□ 0.97
CPSF4-203ENST00000430038 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.13■□□□□ 0.97
CPSF4-203ENST00000430038 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
CPSF4-203ENST00000430038 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
CPSF4-203ENST00000430038 MROH7-TTC4A0A0A0MT08 1334 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 GPR75-ASB3A0A0A6YYF3 556 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 CETPP11597 493 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 PPATQ06203 517 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 DZIP1Q86YF9 867 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms