RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 EHD4Q9H223 541 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 TUT1Q9H6E5 874 aaKnown RBP9□□□□□ -0.97
LINC00458-202ENST00000427299 NPHS2Q9NP85 383 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 NEFLP07196 543 aa8.99□□□□□ -0.97
LINC00458-202ENST00000427299 SERPINB4P48594 390 aa8.99□□□□□ -0.97
LINC00458-202ENST00000427299 PTPN12Q05209 780 aaKnown RBP8.99□□□□□ -0.97
LINC00458-202ENST00000427299 FAM129BQ96TA1 746 aa8.99□□□□□ -0.97
LINC00458-202ENST00000427299 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
LINC00458-202ENST00000427299 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
LINC00458-202ENST00000427299 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 OGFOD3Q6PK18 319 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 GLYCTKQ8IVS8 523 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 ASIC4Q96FT7 647 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 USTQ9Y2C2 406 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
LINC00458-202ENST00000427299 CPNE3O75131 537 aaKnown RBP8.97□□□□□ -0.97
LINC00458-202ENST00000427299 JUNBP17275 347 aaPredicted RBP8.97□□□□□ -0.97
LINC00458-202ENST00000427299 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
LINC00458-202ENST00000427299 BCL7CQ8WUZ0 217 aaPredicted RBP8.97□□□□□ -0.97
LINC00458-202ENST00000427299 NDUFB5O43674 189 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 IGHA2P01877 340 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 PDE3BQ13370 1112 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 PDE3AQ14432 1141 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 B4GALNT3Q6L9W6 998 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 POU5F2Q8N7G0 328 aa8.96□□□□□ -0.98
LINC00458-202ENST00000427299 TMPRSS2O15393 492 aa8.95□□□□□ -0.98
LINC00458-202ENST00000427299 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
LINC00458-202ENST00000427299 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
LINC00458-202ENST00000427299 CCDC74AQ96AQ1 378 aa8.94□□□□□ -0.98
LINC00458-202ENST00000427299 WDR89Q96FK6 387 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-202ENST00000427299 CCDC86Q9H6F5 360 aaKnown RBP8.94□□□□□ -0.98
LINC00458-202ENST00000427299 LGR6Q9HBX8 967 aa8.94□□□□□ -0.98
LINC00458-202ENST00000427299 CRIM1Q9NZV1 1036 aa8.94□□□□□ -0.98
LINC00458-202ENST00000427299 SLC5A6Q9Y289 635 aa8.94□□□□□ -0.98
LINC00458-202ENST00000427299 PAPLNO95428 1278 aa8.93□□□□□ -0.98
LINC00458-202ENST00000427299 ZNF574Q6ZN55 896 aaPredicted RBP8.93□□□□□ -0.98
LINC00458-202ENST00000427299 SPRED2Q7Z698 418 aa8.93□□□□□ -0.98
LINC00458-202ENST00000427299 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
LINC00458-202ENST00000427299 DNAJC25Q9H1X3 360 aa8.93□□□□□ -0.98
LINC00458-202ENST00000427299 TMEM238LA0A1B0GVL6 79 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 EIF1AYO14602 144 aaKnown RBP8.92□□□□□ -0.98
LINC00458-202ENST00000427299 GPR182O15218 404 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 LIG1P18858 919 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 JAG1P78504 1218 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 STK11IPQ8N1F8 1099 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 GLIS3Q8NEA6 775 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 PCDHGC5Q9Y5F6 944 aa8.92□□□□□ -0.98
LINC00458-202ENST00000427299 ZNF862O60290 1169 aa8.91□□□□□ -0.98
LINC00458-202ENST00000427299 CDK5R2Q13319 367 aa8.91□□□□□ -0.98
LINC00458-202ENST00000427299 GRM2Q14416 872 aa8.91□□□□□ -0.98
LINC00458-202ENST00000427299 CYP27C1Q4G0S4 372 aa8.91□□□□□ -0.98
LINC00458-202ENST00000427299 FANCD2OSQ96PS1 177 aa8.91□□□□□ -0.98
LINC00458-202ENST00000427299 C8AP07357 584 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 FAM87AP0C7U9 286 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 ID3Q02535 119 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 PLCL1Q15111 1095 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 ATXN3LQ9H3M9 355 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 TRAK1Q9UPV9 953 aa8.9□□□□□ -0.98
LINC00458-202ENST00000427299 GADD45BO75293 160 aaPredicted RBP8.89□□□□□ -0.99
LINC00458-202ENST00000427299 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
LINC00458-202ENST00000427299 ZNF792Q3KQV3 632 aa8.89□□□□□ -0.99
LINC00458-202ENST00000427299 PLD6Q8N2A8 252 aaKnown RBP8.89□□□□□ -0.99
LINC00458-202ENST00000427299 ZC3H12CQ9C0D7 883 aaKnown RBP8.89□□□□□ -0.99
LINC00458-202ENST00000427299 NIF3L1Q9GZT8 377 aa8.89□□□□□ -0.99
LINC00458-202ENST00000427299 PIDD1Q9HB75 910 aa8.89□□□□□ -0.99
LINC00458-202ENST00000427299 DISC1Q9NRI5 854 aa8.89□□□□□ -0.99
LINC00458-202ENST00000427299 KRT82Q9NSB4 513 aa8.89□□□□□ -0.99
LINC00458-202ENST00000427299 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
LINC00458-202ENST00000427299 SLFN14P0C7P3 912 aa8.88□□□□□ -0.99
LINC00458-202ENST00000427299 FAM181AQ8N9Y4 354 aa8.88□□□□□ -0.99
LINC00458-202ENST00000427299 U3KQE9 123 aa8.88□□□□□ -0.99
LINC00458-202ENST00000427299 BNIP3Q12983 259 aa8.87□□□□□ -0.99
LINC00458-202ENST00000427299 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
LINC00458-202ENST00000427299 SMYD4Q8IYR2 804 aaPredicted RBP8.87□□□□□ -0.99
LINC00458-202ENST00000427299 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
LINC00458-202ENST00000427299 EPS8L3Q8TE67 593 aaKnown RBP8.87□□□□□ -0.99
LINC00458-202ENST00000427299 TTLL4Q14679 1199 aa8.86□□□□□ -0.99
LINC00458-202ENST00000427299 PDZD3Q86UT5 571 aa8.86□□□□□ -0.99
LINC00458-202ENST00000427299 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
LINC00458-202ENST00000427299 CSRNP1Q96S65 589 aa8.86□□□□□ -0.99
LINC00458-202ENST00000427299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
LINC00458-202ENST00000427299 FUT4P22083 530 aa8.85□□□□□ -0.99
LINC00458-202ENST00000427299 CARMIL2Q6F5E8 1435 aa8.85□□□□□ -0.99
LINC00458-202ENST00000427299 CD8BP10966 210 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 RBCK1Q9BYM8 510 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 MKNK2Q9HBH9 465 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 TMEM39AQ9NV64 488 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 VAV3Q9UKW4 847 aa8.84□□□□□ -0.99
LINC00458-202ENST00000427299 BIN1O00499 593 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 LEFTY1O75610 366 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 NEFMP07197 916 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 HCLS1P14317 486 aaPredicted RBP8.83□□□□□ -1
LINC00458-202ENST00000427299 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00458-202ENST00000427299 PRKCQQ04759 706 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms