RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ARNTP27540 789 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 CRKP46108 304 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 SOX9P48436 509 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 AFF1P51825 1210 aaKnown RBP9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 RBL2Q08999 1139 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 ZNF252P-AS1Q0IIN9 211 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 LRRC14Q15048 493 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 GAL3ST3Q96A11 431 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 DNAJC2Q99543 621 aaKnown RBP9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 MIR1-1HGQ9H1L0 117 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 GINM1Q9NU53 330 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 UBP1Q9NZI7 540 aa9.64□□□□□ -0.87
HMGB1P32-201ENST00000425971 FAM221AA4D161 298 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 COL9A2Q14055 689 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 BNC2Q6ZN30 1099 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 SLITRK4Q8IW52 837 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 IL22RA1Q8N6P7 574 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 GRIN3AQ8TCU5 1115 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 WNT8BQ93098 351 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
HMGB1P32-201ENST00000425971 MAPKBP1O60336 1514 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 F13A1P00488 732 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 SCARA3Q6AZY7 606 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 LLGL2Q6P1M3 1020 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 EDARADDQ8WWZ3 215 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 GATAD2BQ8WXI9 593 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 PRDM6Q9NQX0 595 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 PPME1Q9Y570 386 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 ROBO2Q9HCK4 1378 aa9.62□□□□□ -0.87
HMGB1P32-201ENST00000425971 GRIN2BQ13224 1484 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 M0R082 166 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 OIP5O43482 229 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 WIPF1O43516 503 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 LILRB5O75023 590 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 GMPRP36959 345 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 APOBRQ0VD83 1088 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 SEPT6Q14141 434 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 CHSY3Q70JA7 882 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 ZNF417Q8TAU3 575 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 ZNF587Q96SQ5 575 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 CACNA2D2Q9NY47 1150 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 STRIP2Q9ULQ0 834 aa9.61□□□□□ -0.87
HMGB1P32-201ENST00000425971 CILPO75339 1184 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 MPP2Q14168 576 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 DPH6Q7L8W6 267 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 FBXO27Q8NI29 283 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 NKD1Q969G9 470 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 LNPKQ9C0E8 428 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 OSGEPQ9NPF4 335 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 LRRC4BQ9NT99 713 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
HMGB1P32-201ENST00000425971 SOGA1O94964 1423 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 SHISA8B8ZZ34 492 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 LINC01387J3KSC0 135 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 TM4SF5O14894 197 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 STK10O94804 968 aaKnown RBP9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 GSTP1P09211 210 aaKnown RBP9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 LMNB1P20700 586 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 C19orf57Q0VDD7 668 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 TXNDC11Q6PKC3 985 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 BTBD6Q96KE9 485 aa9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 HIRIP3Q9BW71 556 aaPredicted RBP9.59□□□□□ -0.87
HMGB1P32-201ENST00000425971 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 TRIM37O94972 964 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 CDC25BP30305 580 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 GSTM4Q03013 218 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 PTPN11Q06124 597 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 COL9A3Q14050 684 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 FAM117BQ6P1L5 589 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 WFDC8Q8IUA0 241 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
HMGB1P32-201ENST00000425971 TOP2AP11388 1531 aaKnown RBP9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 SHROOM2Q13796 1616 aa9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 FSCN2O14926 492 aa9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 SSBP05455 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 BCRP11274 1271 aa9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 ARL4DP49703 201 aa9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 SEZ6Q53EL9 994 aa9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
HMGB1P32-201ENST00000425971 NID1P14543 1247 aa9.56□□□□□ -0.88
HMGB1P32-201ENST00000425971 SELPP16109 830 aa9.56□□□□□ -0.88
HMGB1P32-201ENST00000425971 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
HMGB1P32-201ENST00000425971 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
HMGB1P32-201ENST00000425971 ZNF408Q9H9D4 720 aa9.56□□□□□ -0.88
HMGB1P32-201ENST00000425971 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
HMGB1P32-201ENST00000425971 ECEL1O95672 775 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms