RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CNKSR1Q969H4 720 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
ACTB-204ENST00000425660 PRC1O43663 620 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 PFKFB2O60825 505 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 DYNLL1P63167 89 aaKnown RBP17.95■□□□□ 0.46
ACTB-204ENST00000425660 GSTO1P78417 241 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 STAG1Q8WVM7 1258 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
ACTB-204ENST00000425660 CNNM2Q9H8M5 875 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 DDX11L8A8MPP1 907 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 PDIA4P13667 645 aaKnown RBP17.95■□□□□ 0.46
ACTB-204ENST00000425660 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 C7orf43Q8WVR3 580 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 ZC3H12CQ9C0D7 883 aaKnown RBP17.95■□□□□ 0.46
ACTB-204ENST00000425660 SNED1Q8TER0 1413 aa17.95■□□□□ 0.46
ACTB-204ENST00000425660 NEDD4P46934 1319 aa17.94■□□□□ 0.46
ACTB-204ENST00000425660 GJB2P29033 226 aa17.94■□□□□ 0.46
ACTB-204ENST00000425660 CHRNA5P30532 468 aa17.94■□□□□ 0.46
ACTB-204ENST00000425660 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
ACTB-204ENST00000425660 RTFDC1Q9BY42 306 aaPredicted RBP17.94■□□□□ 0.46
ACTB-204ENST00000425660 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
ACTB-204ENST00000425660 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.463e-17■□□□□ 10.5
ACTB-204ENST00000425660 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
ACTB-204ENST00000425660 WDR33Q9C0J8 1336 aaKnown RBP17.94■□□□□ 0.46
ACTB-204ENST00000425660 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
ACTB-204ENST00000425660 PPP4CP60510 307 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 PPARAQ07869 468 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 GRIK5Q16478 980 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 EYA3Q99504 573 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
ACTB-204ENST00000425660 SYT1P21579 422 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 APOBRQ0VD83 1088 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 SCRN1Q12765 414 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 MFSD14BQ5SR56 506 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 FAM163AQ96GL9 167 aaPredicted RBP17.93■□□□□ 0.46
ACTB-204ENST00000425660 LLPHQ9BRT6 129 aaKnown RBP17.93■□□□□ 0.46
ACTB-204ENST00000425660 KRT23Q9C075 422 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
ACTB-204ENST00000425660 SUGT1Q9Y2Z0 365 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
ACTB-204ENST00000425660 LDHCP07864 332 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 PCP11498 1178 aaKnown RBP17.92■□□□□ 0.46
ACTB-204ENST00000425660 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
ACTB-204ENST00000425660 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 STK3Q13188 491 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 CC2D2BQ6DHV5 1058 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 CYB5R4Q7L1T6 521 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 NKX2-3Q8TAU0 364 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 TMEM87BQ96K49 555 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
ACTB-204ENST00000425660 SLX4Q8IY92 1834 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 MROH7-TTC4A0A0A0MT08 1334 aa17.92■□□□□ 0.46
ACTB-204ENST00000425660 B4E1Z4 1266 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 RIMBP2O15034 1052 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 STX6O43752 255 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 FGRP09769 529 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
ACTB-204ENST00000425660 ANGEL1Q9UNK9 670 aaKnown RBP17.91■□□□□ 0.46
ACTB-204ENST00000425660 BAG3O95817 575 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 DIXDC1Q155Q3 683 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 SMARCC2Q8TAQ2 1214 aa17.91■□□□□ 0.46
ACTB-204ENST00000425660 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
ACTB-204ENST00000425660 DLEC1Q9Y238 1755 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 SH2B2O14492 632 aaPredicted RBP17.9■□□□□ 0.46
ACTB-204ENST00000425660 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 IGDCC4Q8TDY8 1250 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 ZSWIM5Q9P217 1185 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 GAKO14976 1311 aa17.9■□□□□ 0.46
ACTB-204ENST00000425660 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 ZBTB7AO95365 584 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 PDCP20941 246 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 PTMSP20962 102 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 LIFRP42702 1097 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 GTF2IP78347 998 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 GRIPAP1Q4V328 841 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 SGMS1Q86VZ5 419 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 INCENPQ9NQS7 918 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 ARPP21Q9UBL0 812 aaPredicted RBP17.89■□□□□ 0.45
ACTB-204ENST00000425660 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.45
ACTB-204ENST00000425660 KDM4AO75164 1064 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 ZSCAN22P10073 491 aaPredicted RBP17.88■□□□□ 0.45
ACTB-204ENST00000425660 CHD4Q14839 1912 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 MINDY4BA8MYZ0 360 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 USP17L12C9JPN9 530 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 USP17L21D6R901 530 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
ACTB-204ENST00000425660 HPS5Q9UPZ3 1129 aa17.88■□□□□ 0.45
ACTB-204ENST00000425660 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
ACTB-204ENST00000425660 KIF13BQ9NQT8 1826 aa17.87■□□□□ 0.45
ACTB-204ENST00000425660 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
ACTB-204ENST00000425660 CTDNEP1O95476 244 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms