RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DDX54Q8TDD1 881 aaKnown RBP6.31□□□□□ -1.4
SDCBPP3-201ENST00000419629 WDR18Q9BV38 432 aa6.31□□□□□ -1.4
SDCBPP3-201ENST00000419629 ZNF576Q9H609 170 aa6.31□□□□□ -1.4
SDCBPP3-201ENST00000419629 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
SDCBPP3-201ENST00000419629 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
SDCBPP3-201ENST00000419629 ARID3AQ99856 593 aa6.3□□□□□ -1.4
SDCBPP3-201ENST00000419629 LGR6Q9HBX8 967 aa6.3□□□□□ -1.4
SDCBPP3-201ENST00000419629 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
SDCBPP3-201ENST00000419629 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 PLCL1Q15111 1095 aa6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 ECM1Q16610 540 aa6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 ZNF792Q3KQV3 632 aa6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
SDCBPP3-201ENST00000419629 CARMIL2Q6F5E8 1435 aa6.28□□□□□ -1.4
SDCBPP3-201ENST00000419629 CYP27C1Q4G0S4 372 aa6.28□□□□□ -1.4
SDCBPP3-201ENST00000419629 ICMTO60725 284 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 PTPN12Q05209 780 aaKnown RBP6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 BNIP3Q12983 259 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 AP3B2Q13367 1082 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 EHD4Q9H223 541 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
SDCBPP3-201ENST00000419629 BIN1O00499 593 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 PDE4CQ08493 712 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 CDK5R2Q13319 367 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 FAM181AQ8N9Y4 354 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 CCDC86Q9H6F5 360 aaKnown RBP6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 ABCB6Q9NP58 842 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 EGFL7Q9UHF1 273 aa6.26□□□□□ -1.41
SDCBPP3-201ENST00000419629 NEFLP07196 543 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 FAM87AP0C7U9 286 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 CD8BP10966 210 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 LIG1P18858 919 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 FUT4P22083 530 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 ORC1Q13415 861 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 RPS26P11Q5JNZ5 115 aaPredicted RBP6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 ATG4DQ86TL0 474 aaPredicted RBP6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 GLIS3Q8NEA6 775 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 NETO1Q8TDF5 533 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 NPHS2Q9NP85 383 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 BRPF3Q9ULD4 1205 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 U3KQE9 123 aa6.25□□□□□ -1.41
SDCBPP3-201ENST00000419629 ZNF862O60290 1169 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 CPNE3O75131 537 aaKnown RBP6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 ARHGAP4P98171 946 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 FAAP100Q0VG06 881 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 PRPF40BQ6NWY9 871 aaKnown RBP6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 FANCD2OSQ96PS1 177 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 DISC1Q9NRI5 854 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 MBNL3Q9NUK0 354 aaKnown RBP6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 PCDHGC5Q9Y5F6 944 aa6.24□□□□□ -1.41
SDCBPP3-201ENST00000419629 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 CCDC74AQ96AQ1 378 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 FAM129BQ96TA1 746 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 ZC3H12CQ9C0D7 883 aaKnown RBP6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 ATXN3LQ9H3M9 355 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 PIDD1Q9HB75 910 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 ADAMTS6Q9UKP5 1117 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
SDCBPP3-201ENST00000419629 CD96P40200 585 aa6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 ZNF157P51786 506 aaPredicted RBP6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 ID3Q02535 119 aa6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 PRKCQQ04759 706 aa6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 ZNF124Q15973 351 aa6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 KIF4BQ2VIQ3 1234 aa6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 SMYD4Q8IYR2 804 aaPredicted RBP6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
SDCBPP3-201ENST00000419629 H3BRB1 525 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 EIF1AYO14602 144 aaKnown RBP6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 LEFTY1O75610 366 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 IGHA2P01877 340 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 GLYCTKQ8IVS8 523 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 DNAJC25Q9H1X3 360 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 TUT1Q9H6E5 874 aaKnown RBP6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 MKNK2Q9HBH9 465 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 KRT82Q9NSB4 513 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 USTQ9Y2C2 406 aa6.21□□□□□ -1.42
SDCBPP3-201ENST00000419629 DBX1A6NMT0 343 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 NDUFB5O43674 189 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 GSTP1P09211 210 aaKnown RBP6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 SERPINB4P48594 390 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 OXCT1P55809 520 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 HNRNPUQ00839 825 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 LRRN4CLQ8ND94 238 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 PI4K2BQ8TCG2 481 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms