RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 GRIK4Q16099 956 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 SCARA3Q6AZY7 606 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 BNC2Q6ZN30 1099 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-202ENST00000407343 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-202ENST00000407343 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-202ENST00000407343 USP26Q9BXU7 913 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
PTPN12-202ENST00000407343 NOP53Q9NZM5 478 aaKnown RBP10.23□□□□□ -0.77
PTPN12-202ENST00000407343 PCDHGC5Q9Y5F6 944 aa10.23□□□□□ -0.77
PTPN12-202ENST00000407343 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 GJA8P48165 433 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 LRRC14Q15048 493 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 MAP1SQ66K74 1059 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-202ENST00000407343 IGF2-ASQ6U949 168 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 CCDC84Q86UT8 332 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-202ENST00000407343 GPBAR1Q8TDU6 330 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 CORO1BQ9BR76 489 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 CBX8Q9HC52 389 aa10.22□□□□□ -0.77
PTPN12-202ENST00000407343 F13A1P00488 732 aa10.21□□□□□ -0.77
PTPN12-202ENST00000407343 CRKP46108 304 aa10.21□□□□□ -0.77
PTPN12-202ENST00000407343 PAK2Q13177 524 aa10.21□□□□□ -0.77
PTPN12-202ENST00000407343 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-202ENST00000407343 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.21□□□□□ -0.77
PTPN12-202ENST00000407343 SCARF2Q96GP6 870 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-202ENST00000407343 SPON2Q9BUD6 331 aa10.21□□□□□ -0.77
PTPN12-202ENST00000407343 TMPRSS13Q9BYE2 586 aa10.21□□□□□ -0.77
PTPN12-202ENST00000407343 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 CDK8P49336 464 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 KIF4BQ2VIQ3 1234 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 NAALADL2Q58DX5 795 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 GOLM1Q8NBJ4 401 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 KCNB2Q92953 911 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 WDR18Q9BV38 432 aa10.2□□□□□ -0.78
PTPN12-202ENST00000407343 CILPO75339 1184 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 LIG1P18858 919 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 DUOXA2Q1HG44 320 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 PRRT3Q5FWE3 981 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 FBXO27Q8NI29 283 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 RASGRP4Q8TDF6 673 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 GATAD2BQ8WXI9 593 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 NT5C1AQ9BXI3 368 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 LRRC3Q9BY71 257 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 MIR1-1HGQ9H1L0 117 aa10.19□□□□□ -0.78
PTPN12-202ENST00000407343 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
PTPN12-202ENST00000407343 MEGF11A6BM72 1044 aa10.18□□□□□ -0.78
PTPN12-202ENST00000407343 TMEM130Q8N3G9 435 aa10.18□□□□□ -0.78
PTPN12-202ENST00000407343 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
PTPN12-202ENST00000407343 UBP1Q9NZI7 540 aa10.18□□□□□ -0.78
PTPN12-202ENST00000407343 SYNGAP1Q96PV0 1343 aa10.17□□□□□ -0.78
PTPN12-202ENST00000407343 F8W735 103 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-202ENST00000407343 SNAP47Q5SQN1 464 aa10.17□□□□□ -0.78
PTPN12-202ENST00000407343 Q6ZS46 218 aa10.17□□□□□ -0.78
PTPN12-202ENST00000407343 ACAD11Q709F0 780 aa10.17□□□□□ -0.78
PTPN12-202ENST00000407343 SLC43A3Q8NBI5 491 aa10.17□□□□□ -0.78
PTPN12-202ENST00000407343 LENG1Q96BZ8 264 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-202ENST00000407343 AOC2O75106 756 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 GSK3AP49840 483 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 EXOSC6Q5RKV6 272 aaKnown RBP10.16□□□□□ -0.78
PTPN12-202ENST00000407343 GPRASP2Q96D09 838 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 SUGCTQ9HAC7 445 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 CAPN10Q9HC96 672 aa10.16□□□□□ -0.78
PTPN12-202ENST00000407343 GFRA2O00451 464 aa10.15□□□□□ -0.78
PTPN12-202ENST00000407343 INPP5AQ14642 412 aa10.15□□□□□ -0.78
PTPN12-202ENST00000407343 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.78
PTPN12-202ENST00000407343 JARID2Q92833 1246 aaPredicted RBP10.15□□□□□ -0.78
PTPN12-202ENST00000407343 RUSC1Q9BVN2 902 aa10.15□□□□□ -0.78
PTPN12-202ENST00000407343 INPP5FQ9Y2H2 1132 aa10.15□□□□□ -0.78
PTPN12-202ENST00000407343 TIAF1O95411 115 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 RING1Q06587 406 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
PTPN12-202ENST00000407343 LRFN4Q6PJG9 635 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 SLITRK4Q8IW52 837 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 SMG8Q8ND04 991 aaKnown RBP10.14□□□□□ -0.79
PTPN12-202ENST00000407343 GMLQ99445 158 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 PPP1R9AQ9ULJ8 1098 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
PTPN12-202ENST00000407343 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 ALX3O95076 343 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
PTPN12-202ENST00000407343 MPP2Q14168 576 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 ADGRE1Q14246 886 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 PLPPR2Q96GM1 343 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 RNF208Q9H0X6 261 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 STK17AQ9UEE5 414 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
PTPN12-202ENST00000407343 POLR3KQ9Y2Y1 108 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-202ENST00000407343 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
PTPN12-202ENST00000407343 TLR3O15455 904 aaKnown RBP10.12□□□□□ -0.79
PTPN12-202ENST00000407343 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
PTPN12-202ENST00000407343 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
PTPN12-202ENST00000407343 GSX1Q9H4S2 264 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-202ENST00000407343 ATF4P18848 351 aaPredicted RBP10.11□□□□□ -0.79
PTPN12-202ENST00000407343 LMNB1P20700 586 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms