RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GBA2Q9HCG7 927 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 HCSTQ9UBK5 93 aa7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
HMGB1P20-201ENST00000402555 FOXN1O15353 648 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 GNAI3P08754 354 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 RLBP1P12271 317 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 FGFR2P21802 821 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 PTPREP23469 700 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 HUNKP57058 714 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 CAMK2BQ13554 666 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 PUM3Q15397 648 aaKnown RBP7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 GRIK5Q16478 980 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 FBXO33Q7Z6M2 555 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZDHHC16Q969W1 377 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZBED3Q96IU2 234 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZIC5Q96T25 663 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 HDAC9Q9UKV0 1011 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 FAM205AQ6ZU69 1335 aa7.19□□□□□ -1.26
HMGB1P20-201ENST00000402555 CLRN2A0PK11 232 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 FRAT2O75474 233 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 IFIT1P09914 478 aaKnown RBP7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 RBM5P52756 815 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 DLGAP5Q15398 846 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 ATP2B3Q16720 1220 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 CFAP100Q494V2 611 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 CAVIN4Q5BKX8 364 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 MOB2Q70IA6 237 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 C2orf69Q8N8R5 385 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 ADAM33Q9BZ11 813 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 C1orf115Q9H7X2 142 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
HMGB1P20-201ENST00000402555 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 THSD7BQ9C0I4 1608 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 PNMA6EA0A0J9YXQ4 647 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 UBE2Q2LH0YL09 131 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 CIAO1O76071 339 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 GNAI2P04899 355 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 SLC5A1P13866 664 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ADORA1P30542 326 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ECE1P42892 770 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 FKBP1AP62942 108 aaKnown RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 PRKG1Q13976 671 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ITPRIPQ8IWB1 547 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 FTSJ3Q8IY81 847 aaKnown RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 DZIP1LQ8IYY4 767 aaKnown RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 PANK1Q8TE04 598 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 LPIN2Q92539 896 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 AIDAQ96BJ3 306 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 PRMT6Q96LA8 375 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZBED2Q9BTP6 218 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 VEZTQ9HBM0 779 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 COPRSQ9NQ92 184 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 WBP1LQ9NX94 342 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 CEP126Q9P2H0 1117 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 TTF2Q9UNY4 1162 aaKnown RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 FZD1Q9UP38 647 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 HDAC5Q9UQL6 1122 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ARAP2Q8WZ64 1704 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 MYH13Q9UKX3 1938 aa7.17□□□□□ -1.26
HMGB1P20-201ENST00000402555 ECM29Q5VYK3 1845 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 FAM155AB1AL88 458 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 IL15P40933 162 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 PHKA1P46020 1223 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 CRKP46108 304 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZNF157P51786 506 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 LBX1P52954 281 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 TFCP2Q12800 502 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 MTX1Q13505 466 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 TTLL12Q14166 644 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 RGMBQ6NW40 437 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 APOBEC3FQ8IUX4 373 aaKnown RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 HHIPL1Q96JK4 782 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 TDRD3Q9H7E2 651 aaKnown RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 PCDHGA10Q9Y5H3 936 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 SSC5DA1L4H1 1573 aa7.16□□□□□ -1.26
HMGB1P20-201ENST00000402555 PAPPA2Q9BXP8 1791 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 HSPA8P11142 646 aaKnown RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 MAP2K2P36507 400 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 CTCFP49711 727 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 MMP14P50281 582 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 CACNB3P54284 484 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 TIMM10P62072 90 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 KIF23Q02241 960 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 MAP2K1Q02750 393 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 TBC1D22AQ8WUA7 517 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 KCTD12Q96CX2 325 aaKnown RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 DEFB129Q9H1M3 183 aa7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P20-201ENST00000402555 A0A1B0GUL7 405 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 TCP10L2B9ZVM9 353 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms