RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 THUMPD2Q9BTF0 503 aaKnown RBP11.21□□□□□ -0.62
PTPRM-203ENST00000400060 SPG7Q9UQ90 795 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 FANCAO15360 1455 aa11.21□□□□□ -0.62
PTPRM-203ENST00000400060 IDEP14735 1019 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 SLC30A9Q6PML9 568 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 NUP58Q9BVL2 599 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 SNUPNO95149 360 aaKnown RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CPP00450 1065 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ICA1Q05084 483 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC65Q8IXS2 484 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ARHGAP24Q8N264 748 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 HAUS4Q9H6D7 363 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CNOT10Q9H9A5 744 aaKnown RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 VAMP4O75379 141 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 GYS2P54840 703 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 PLEKHO1Q53GL0 409 aaPredicted RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 STMN2Q93045 179 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 RMDN2Q96LZ7 410 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 SEC62Q99442 399 aaKnown RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 NOS1P29475 1434 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 RPS6KB1P23443 525 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ST5P78524 1137 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 LMBR1Q8WVP7 490 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
PTPRM-203ENST00000400060 PRDM15P57071 1507 aaPredicted RBP11.2□□□□□ -0.62
PTPRM-203ENST00000400060 TARSL2A2RTX5 802 aaKnown RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC197Q8NCU1 140 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 C3orf20Q8ND61 904 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 SPDL1Q96EA4 605 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 PFDN1O60925 122 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 ANKRD27Q96NW4 1050 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 RASSF10A6NK89 507 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 PPP1R2P41236 205 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
PTPRM-203ENST00000400060 CAPZA3Q96KX2 299 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 KIF2CQ99661 725 aa11.19□□□□□ -0.62
PTPRM-203ENST00000400060 CETN3O15182 167 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 EMBQ6PCB8 327 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 GOPCQ9HD26 462 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 MARCH6O60337 910 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■■■□ 20.7
PTPRM-203ENST00000400060 IFT88Q13099 833 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC26Q8TAB7 109 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 RHPN1Q8TCX5 695 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 GFM2Q969S9 779 aaKnown RBP11.18□□□□□ -0.62
PTPRM-203ENST00000400060 JAKMIP2Q96AA8 810 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 SELENOSQ9BQE4 189 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 ZDHHC9Q9Y397 364 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 NR1I2O75469 434 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 LZICQ8WZA0 190 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 PANX2Q96RD6 677 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 TSG101Q99816 390 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 ST7Q9NRC1 585 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 CTTNBP2NLQ9P2B4 639 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 LMNAP02545 664 aaKnown RBP11.18□□□□□ -0.62
PTPRM-203ENST00000400060 MUM1Q2TAK8 710 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 RCSD1Q6JBY9 416 aa11.18□□□□□ -0.62
PTPRM-203ENST00000400060 LAMC1P11047 1609 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 HSP90AA5PQ58FG0 334 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC77Q9BR77 488 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 EVI5O60447 810 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 RPSAP08865 295 aaKnown RBP11.17□□□□□ -0.62
PTPRM-203ENST00000400060 MTX1Q13505 466 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 IDI1Q13907 227 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 PHLDB3Q6NSJ2 640 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 VSTM4Q8IW00 320 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms