RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 MMP14P50281 582 aa10.73□□□□□ -0.69
BRCC3-206ENST00000399042 NMIQ13287 307 aaPredicted RBP10.73□□□□□ -0.69
BRCC3-206ENST00000399042 UBE3CQ15386 1083 aa10.73□□□□□ -0.69
BRCC3-206ENST00000399042 GRIK5Q16478 980 aa10.73□□□□□ -0.69
BRCC3-206ENST00000399042 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
BRCC3-206ENST00000399042 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
BRCC3-206ENST00000399042 AATFQ9NY61 560 aaKnown RBP eCLIP10.73□□□□□ -0.69
BRCC3-206ENST00000399042 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
BRCC3-206ENST00000399042 COL1A1P02452 1464 aaPredicted RBP10.73□□□□□ -0.69
BRCC3-206ENST00000399042 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-206ENST00000399042 MBD4O95243 580 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 CHMLP26374 656 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 BTDP43251 543 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 HDLBPQ00341 1268 aaKnown RBP10.72□□□□□ -0.69
BRCC3-206ENST00000399042 MCMDC2Q4G0Z9 681 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 TBC1D10BQ4KMP7 808 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-206ENST00000399042 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-206ENST00000399042 HHIPL2Q6UWX4 724 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 TICAM2Q86XR7 235 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 APPBP2Q92624 585 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 MYOZ2Q9NPC6 264 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 HELLSQ9NRZ9 838 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 USP40Q9NVE5 1235 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 GPRC5DQ9NZD1 345 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 HACL1Q9UJ83 578 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
BRCC3-206ENST00000399042 COL4A5P29400 1685 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 USP5P45974 858 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 KIF4BQ2VIQ3 1234 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 CERS3Q8IU89 383 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 TEX11Q8IYF3 940 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 ARAP2Q8WZ64 1704 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 FAM227BQ96M60 508 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 GMLQ99445 158 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 CRNKL1Q9BZJ0 848 aaKnown RBP10.71□□□□□ -0.69
BRCC3-206ENST00000399042 ARMT1Q9H993 441 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 VEZTQ9HBM0 779 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
BRCC3-206ENST00000399042 A0A1B0GUL6 1792 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 EPS15P42566 896 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 DYNLL1P63167 89 aaKnown RBP10.7□□□□□ -0.7
BRCC3-206ENST00000399042 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 ZDHHC15Q96MV8 337 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
BRCC3-206ENST00000399042 MRIQ9BWK5 157 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 NACAP1Q9BZK3 213 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 RRAGCQ9HB90 399 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 ANO2Q9NQ90 1003 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 ADARB2Q9NS39 739 aaKnown RBP10.7□□□□□ -0.7
BRCC3-206ENST00000399042 SLC4A4Q9Y6R1 1079 aa10.7□□□□□ -0.7
BRCC3-206ENST00000399042 RFX7Q2KHR2 1363 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 A0A0D9SFI3 127 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 SHTN1A0MZ66 631 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 CLRN2A0PK11 232 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 M0R2C6 588 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 GPAA1O43292 621 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 REC8O95072 547 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 CHGBP05060 677 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 GNAT2P19087 354 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 EPHX2P34913 555 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 TDO2P48775 406 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 ZNF280AP59817 542 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 PICALMQ13492 652 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 PNMA8AQ86V59 439 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 ZSCAN29Q8IWY8 852 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 SH3RF3Q8TEJ3 882 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 OSBP2Q969R2 916 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 TDRD3Q9H7E2 651 aaKnown RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-206ENST00000399042 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
BRCC3-206ENST00000399042 UTRNP46939 3433 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 TCRBV5S4A2TA0A5A2 114 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 TCP10L2B9ZVM9 353 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 YY1P25490 414 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 TNNI2P48788 182 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 CDC42EP5Q6NZY7 148 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 ADGRA1Q86SQ6 560 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 LCORLQ8N3X6 602 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 TGFBRAP1Q8WUH2 860 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 DCPSQ96C86 337 aaKnown RBP10.68□□□□□ -0.7
BRCC3-206ENST00000399042 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
BRCC3-206ENST00000399042 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
BRCC3-206ENST00000399042 PRMT6Q96LA8 375 aaPredicted RBP10.68□□□□□ -0.7
BRCC3-206ENST00000399042 ESYT1Q9BSJ8 1104 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 CHD4Q14839 1912 aa10.68□□□□□ -0.7
BRCC3-206ENST00000399042 GAKO14976 1311 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 RAD50Q92878 1312 aa10.67□□□□□ -0.7
BRCC3-206ENST00000399042 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms