RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SYT10Q6XYQ8 523 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 ANKRD7Q92527 254 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 ARMT1Q9H993 441 aa18.38■□□□□ 0.53
ATP2A3-206ENST00000397043 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 NLRP10Q86W26 655 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 CNNM3Q8NE01 707 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 RIPOR2Q9Y4F9 1068 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 MBD4O95243 580 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 TDO2P48775 406 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 CTSWP56202 376 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 NLRP12P59046 1061 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 KCNJ14Q9UNX9 436 aa18.37■□□□□ 0.53
ATP2A3-206ENST00000397043 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 NEDD4P46934 1319 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 CMA1P23946 247 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 UBASH3AP57075 661 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 FANCCQ00597 558 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 ELF2Q15723 593 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 AXDND1Q5T1B0 1012 aaPredicted RBP18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 ZMYM6O95789 1325 aa18.36■□□□□ 0.53
ATP2A3-206ENST00000397043 PDE8BO95263 885 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 TTF1Q15361 905 aaPredicted RBP18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 ARMCX5Q6P1M9 558 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 PRKAB2O43741 272 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 EVCP57679 992 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
ATP2A3-206ENST00000397043 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 CARD10Q9BWT7 1032 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 BTBD18B2RXH4 712 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 SSRP1Q08945 709 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 CSF1RP07333 972 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
ATP2A3-206ENST00000397043 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.53
ATP2A3-206ENST00000397043 FOXN1O15353 648 aa18.33■□□□□ 0.53
ATP2A3-206ENST00000397043 LONRF3Q496Y0 759 aa18.33■□□□□ 0.53
ATP2A3-206ENST00000397043 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
ATP2A3-206ENST00000397043 ZNF827Q17R98 1081 aa18.33■□□□□ 0.52
ATP2A3-206ENST00000397043 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
ATP2A3-206ENST00000397043 DPF2Q92785 391 aa18.33■□□□□ 0.52
ATP2A3-206ENST00000397043 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.52
ATP2A3-206ENST00000397043 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 MFSD6Q6ZSS7 791 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 IFNL3Q8IZI9 196 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 FANCLQ9NW38 375 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 ERICH2A1L162 156 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 RANBP6O60518 1105 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 NYAP1Q6ZVC0 841 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 PPP1R13BQ96KQ4 1090 aa18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-206ENST00000397043 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 PCDHA5Q9Y5H7 936 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 SLC4A4Q9Y6R1 1079 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 MYL5Q02045 173 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 TRMT44Q8IYL2 757 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 TRIM22Q8IYM9 498 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
ATP2A3-206ENST00000397043 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 TRIM28Q13263 835 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 CPDO75976 1380 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 SLU7O95391 586 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 BCAMP50895 628 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 NCAPHQ15003 741 aa18.3■□□□□ 0.52
ATP2A3-206ENST00000397043 NKX1-1Q15270 411 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms