RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	ITGA8	P53708	1063 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	CCDC178	Q5BJE1	867 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	PHLDB2	Q86SQ0	1253 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	DZIP1L	Q8IYY4	767 aa	Known RBP	4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	CXorf38	Q8TB03	319 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	STK32A	Q8WU08	396 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	BRD8	Q9H0E9	1235 aa		4.28	□□□□□ -1.72
PCDH15-208	ENST00000395432	TRIM64	A6NGJ6	449 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	TRIM64B	A6NI03	449 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	PICALM	Q13492	652 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	HSP90AB3P	Q58FF7	597 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	FKBP15	Q5T1M5	1219 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	PARP9	Q8IXQ6	854 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	CCDC144CP	Q8IYA2	1237 aa		4.28	□□□□□ -1.73
PCDH15-208	ENST00000395432	KIAA0754	O94854	1291 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	MYCLP1	P12525	358 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	CCDC40	Q4G0X9	1142 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	VMP1	Q96GC9	406 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	ZBED2	Q9BTP6	218 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	CEP131	Q9UPN4	1083 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	HEG1	Q9ULI3	1381 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	DDX3Y	O15523	660 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	TBC1D12	O60347	775 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	LDHB	P07195	334 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	SETSIP	P0DME0	302 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	YARS	P54577	528 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	GBP6	Q6ZN66	633 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	ZBTB46	Q86UZ6	589 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	EFCAB3	Q8N7B9	438 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	STAG1	Q8WVM7	1258 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	HSP90AB1	P08238	724 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	C14orf80	Q86SX3	495 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	ROGDI	Q9GZN7	287 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	BRD9	Q9H8M2	597 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	KDM6A	O15550	1401 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	PALM3	A6NDB9	673 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	SPECC1	Q5M775	1068 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	MSL3	Q8N5Y2	521 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	EIF3A	Q14152	1382 aa	Known RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	CDC45	O75419	566 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	HPD	P32754	393 aa	Predicted RBP	4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	ARMC9	Q7Z3E5	817 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	KRT25	Q7Z3Z0	450 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	STAM	Q92783	540 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	YY1AP1	Q9H869	796 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	FRMPD3	Q5JV73	1810 aa		4.27	□□□□□ -1.73
PCDH15-208	ENST00000395432	PLEKHG3	A1L390	1219 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432		B4DLN1	442 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	NDUFB5	O43674	189 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	PCSK2	P16519	638 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	MYSM1	Q5VVJ2	828 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	ZBTB33	Q86T24	672 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	HOOK3	Q86VS8	718 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	BBOF1	Q8ND07	529 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	FANCL	Q9NW38	375 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	MAP3K20	Q9NYL2	800 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	CALCA	P01258	141 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	PDHA1	P08559	390 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	RHOXF2B	P0C7M4	288 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	MRPL28	Q13084	256 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	IQSEC1	Q6DN90	963 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SLC4A11	Q8NBS3	891 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	RHOXF2	Q9BQY4	288 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	ZNF395	Q9H8N7	513 aa	Predicted RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	RIPOR2	Q9Y4F9	1068 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	KRT9	P35527	623 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	IL2	P60568	153 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	AMOTL1	Q8IY63	956 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	RUNDC1	Q96C34	613 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	FAN1	Q9Y2M0	1017 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	PPP1R37	O75864	691 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	PRPF6	O94906	941 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	GUCA2A	Q02747	115 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	USH1G	Q495M9	461 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	ISLR2	Q6UXK2	745 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	USP48	Q86UV5	1035 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	BANK1	Q8NDB2	785 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SLC7A3	Q8WY07	619 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	RTF1	Q92541	710 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	DDX23	Q9BUQ8	820 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	LGR6	Q9HBX8	967 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	C10orf71	Q711Q0	1435 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	STAM2	O75886	525 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SNUPN	O95149	360 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	MRPS35	P82673	323 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	PGM2L1	Q6PCE3	622 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	ELMSAN1	Q6PJG2	1045 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SPATA5	Q8NB90	893 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	TTC14	Q96N46	770 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	SCAF8	Q9UPN6	1271 aa	Known RBP	4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	CORO2B	Q9UQ03	480 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	JAG2	Q9Y219	1238 aa		4.26	□□□□□ -1.73
PCDH15-208	ENST00000395432	KIF20B	Q96Q89	1820 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms