RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 COL4A1P02462 1669 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 TOM1O60784 492 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 ME1P48163 572 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 TERF1P54274 439 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 NTRK3Q16288 839 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 AKNAD1Q5T1N1 836 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 TDRD7Q8NHU6 1098 aaKnown RBP17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 VPS72Q15906 364 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 LUZP1Q86V48 1076 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 ANKRD18AQ8IVF6 992 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 KCNG4Q8TDN1 519 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 NACAP1Q9BZK3 213 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 KRT23Q9C075 422 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 SENP2Q9HC62 589 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 TACC3Q9Y6A5 838 aa17.87■□□□□ 0.45
UBE2D3-207ENST00000394801 ZBTB43O43298 467 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 CDC27P30260 824 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 LCORLQ8N3X6 602 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 STAG1Q8WVM7 1258 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 NID2Q14112 1375 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 KIAA2012Q0VF49 1180 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 INCENPQ9NQS7 918 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 LRP2BPQ9P2M1 347 aa17.86■□□□□ 0.45
UBE2D3-207ENST00000394801 CHD4Q14839 1912 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 PRKAB2O43741 272 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 TPM3P06753 285 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 ZNF165P49910 485 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 MFSD6Q6ZSS7 791 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 FSIP1Q8NA03 581 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 CLIC4Q9Y696 253 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
UBE2D3-207ENST00000394801 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 KINO60870 393 aaKnown RBP17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 GNL3LQ9NVN8 582 aaKnown RBP17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 ALG1Q9BT22 464 aa17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 DNAJC25Q9H1X3 360 aa17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
UBE2D3-207ENST00000394801 STK38Q15208 465 aa17.83■□□□□ 0.45
UBE2D3-207ENST00000394801 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.45
UBE2D3-207ENST00000394801 PIBF1Q8WXW3 757 aa17.83■□□□□ 0.45
UBE2D3-207ENST00000394801 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.45
UBE2D3-207ENST00000394801 MINPP1Q9UNW1 487 aa17.83■□□□□ 0.45
UBE2D3-207ENST00000394801 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 SPTLC2O15270 562 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 TDO2P48775 406 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 MICU3Q86XE3 530 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 PKNOX2Q96KN3 472 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 STK36Q9NRP7 1315 aa17.83■□□□□ 0.44
UBE2D3-207ENST00000394801 RXRAP19793 462 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 IARSP41252 1262 aaKnown RBP17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 IQCB1Q15051 598 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 ANO1Q5XXA6 986 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 ZNF830Q96NB3 372 aaPredicted RBP17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 GOLGA8AA7E2F4 631 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 RPS6KA4O75676 772 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 CYP7A1P22680 504 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 GYG1P46976 350 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 SF3A1Q15459 793 aaKnown RBP17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 STX1AQ16623 288 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 KRT40Q6A162 431 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 TMTC2Q8N394 836 aa17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
UBE2D3-207ENST00000394801 GOLGA6L6A8MZA4 724 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 RANBP6O60518 1105 aaKnown RBP17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 RCAN1P53805 252 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 PLA2G4DQ86XP0 818 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 MPNDQ8N594 471 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 PHKBQ93100 1093 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 CASZ1Q86V15 1759 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 CCDC69A6NI79 296 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms