RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 NPR1P16066 1061 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 SKOR2Q2VWA4 1001 aaPredicted RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 LLPHQ9BRT6 129 aaKnown RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 PDIA3P30101 505 aaKnown RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 DEKP35659 375 aaKnown RBP17.65■□□□□ 0.42
CCT4-201ENST00000394440 TRDNQ13061 729 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 MYH2Q9UKX2 1941 aa17.65■□□□□ 0.42
CCT4-201ENST00000394440 F13A1P00488 732 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 IL1R1P14778 569 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 PDE6BP35913 854 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 TDO2P48775 406 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 DYNLL1P63167 89 aaKnown RBP17.64■□□□□ 0.41
CCT4-201ENST00000394440 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 STAG1Q8WVM7 1258 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 CD209Q9NNX6 404 aa17.64■□□□□ 0.41
CCT4-201ENST00000394440 JAK2O60674 1132 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 PDCP20941 246 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 AKNAD1Q5T1N1 836 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 SPTY2D1Q68D10 685 aaPredicted RBP17.63■□□□□ 0.41
CCT4-201ENST00000394440 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
CCT4-201ENST00000394440 CDK5RAP2Q96SN8 1893 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 CTDNEP1O95476 244 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 ANAPC4Q9UJX5 808 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
CCT4-201ENST00000394440 B4E1Z4 1266 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 LARP1BQ659C4 914 aaKnown RBP17.62■□□□□ 0.41
CCT4-201ENST00000394440 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 BRPF3Q9ULD4 1205 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 SH2B2O14492 632 aaPredicted RBP17.62■□□□□ 0.41
CCT4-201ENST00000394440 KLHL40Q2TBA0 621 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 MASTLQ96GX5 879 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 CNNM2Q9H8M5 875 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 STK32BQ9NY57 414 aa17.62■□□□□ 0.41
CCT4-201ENST00000394440 ALDH1B1P30837 517 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 PPARAQ07869 468 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 TMEM87BQ96K49 555 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 ANGEL1Q9UNK9 670 aaKnown RBP17.61■□□□□ 0.41
CCT4-201ENST00000394440 HPS5Q9UPZ3 1129 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
CCT4-201ENST00000394440 IGDCC4Q8TDY8 1250 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 KRT23Q9C075 422 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
CCT4-201ENST00000394440 SLX4Q8IY92 1834 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 LDHBP07195 334 aaKnown RBP17.6■□□□□ 0.41
CCT4-201ENST00000394440 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
CCT4-201ENST00000394440 GRIK5Q16478 980 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
CCT4-201ENST00000394440 CHMP4CQ96CF2 233 aa17.6■□□□□ 0.41
CCT4-201ENST00000394440 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCT4-201ENST00000394440 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
CCT4-201ENST00000394440 PRPF40AO75400 957 aaKnown RBP17.59■□□□□ 0.41
CCT4-201ENST00000394440 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
CCT4-201ENST00000394440 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
CCT4-201ENST00000394440 ZSWIM5Q9P217 1185 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
CCT4-201ENST00000394440 KDM4AO75164 1064 aa17.58■□□□□ 0.41
CCT4-201ENST00000394440 MTA3Q9BTC8 594 aa17.58■□□□□ 0.41
CCT4-201ENST00000394440 CRNKL1Q9BZJ0 848 aaKnown RBP17.58■□□□□ 0.41
CCT4-201ENST00000394440 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.41
CCT4-201ENST00000394440 FAM205AQ6ZU69 1335 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 GOLGA8BA8MQT2 603 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 LIFRP42702 1097 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
CCT4-201ENST00000394440 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
CCT4-201ENST00000394440 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.4
CCT4-201ENST00000394440 FGRP09769 529 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 ATP8A2Q9NTI2 1148 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 SMIM22K7EJ46 135 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 CTR9Q6PD62 1173 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 MPNDQ8N594 471 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
CCT4-201ENST00000394440 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
CCT4-201ENST00000394440 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
CCT4-201ENST00000394440 PPP4CP60510 307 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 GSTO1P78417 241 aa17.56■□□□□ 0.4
CCT4-201ENST00000394440 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms