RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 GTF2E1P29083 439 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 RPS8P62241 208 aaKnown RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 BICD2Q8TD16 824 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 FAM84BQ96KN1 310 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 MTA3Q9BTC8 594 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 KRT23Q9C075 422 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 FTOQ9C0B1 505 aaKnown RBP eCLIP10.57□□□□□ -0.72
TDP1-202ENST00000393452 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 RTEL1Q9NZ71 1219 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 ZSWIM5Q9P217 1185 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 CCNL1Q9UK58 526 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 NID2Q14112 1375 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 MYH13Q9UKX3 1938 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 SEMA3EO15041 775 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 ZBTB22O15209 634 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 ZPR1O75312 459 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 CDKL5O76039 1030 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
TDP1-202ENST00000393452 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 NTRK3Q16288 839 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 CAMK4Q16566 473 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 CAVIN4Q5BKX8 364 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 BRAPQ7Z569 592 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 ADGRA1Q86SQ6 560 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 NBPF5PQ86XG9 351 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 NLRP3Q96P20 1036 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
TDP1-202ENST00000393452 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
TDP1-202ENST00000393452 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 KDM4AO75164 1064 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 CYP7A1P22680 504 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 CDC27P30260 824 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 CEBPZQ03701 1054 aaKnown RBP10.56□□□□□ -0.72
TDP1-202ENST00000393452 TYRO3Q06418 890 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 OTUD7BQ6GQQ9 843 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 MFSD6Q6ZSS7 791 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 AMIGO3Q86WK7 504 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 RAB11FIP4Q86YS3 637 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
TDP1-202ENST00000393452 RIOK1Q9BRS2 568 aaKnown RBP10.56□□□□□ -0.72
TDP1-202ENST00000393452 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
TDP1-202ENST00000393452 USP25Q9UHP3 1055 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 MRVI1Q9Y6F6 885 aa10.56□□□□□ -0.72
TDP1-202ENST00000393452 ZBTB43O43298 467 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
TDP1-202ENST00000393452 TDO2P48775 406 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 MIGA1Q8NAN2 632 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 ENGASEQ8NFI3 743 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 FAM200AQ8TCP9 573 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 GJD4Q96KN9 370 aaPredicted RBP10.55□□□□□ -0.72
TDP1-202ENST00000393452 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 ANAPC4Q9UJX5 808 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 TM4SF1P30408 202 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 KIF23Q02241 960 aaPredicted RBP10.55□□□□□ -0.72
TDP1-202ENST00000393452 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
TDP1-202ENST00000393452 LINC00301Q8NCQ3 95 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 ABCF2Q9UG63 623 aa10.55□□□□□ -0.72
TDP1-202ENST00000393452 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 IFIT3O14879 490 aaKnown RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 ZNF500O60304 480 aaPredicted RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 YEATS4O95619 227 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 ADCY5O95622 1261 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 MSNP26038 577 aaKnown RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 RCAN1P53805 252 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 FAM182BQ5T319 152 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 CPLX2Q6PUV4 134 aaKnown RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 CKAP2LQ8IYA6 745 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 ZNF384Q8TF68 577 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 ANKRD2Q9GZV1 360 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 RAI14Q9P0K7 980 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
TDP1-202ENST00000393452 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 STK36Q9NRP7 1315 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 A0A1W2PQ27 194 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 A0A1W2PQD8 194 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 CTAGE5O15320 804 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 PPARAQ07869 468 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 ADALQ6DHV7 355 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 GJB4Q9NTQ9 266 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
TDP1-202ENST00000393452 TNRC6CQ9HCJ0 1690 aaKnown RBP10.53□□□□□ -0.72
TDP1-202ENST00000393452 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
TDP1-202ENST00000393452 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms