RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 WWC3Q9ULE0 1092 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 TMPRSS2O15393 492 aa6.48□□□□□ -1.37
TRAV40-201ENST00000390467 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
TRAV40-201ENST00000390467 NFICP08651 508 aa6.48□□□□□ -1.37
TRAV40-201ENST00000390467 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
TRAV40-201ENST00000390467 TRAIPQ9BWF2 469 aa6.48□□□□□ -1.37
TRAV40-201ENST00000390467 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
TRAV40-201ENST00000390467 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
TRAV40-201ENST00000390467 ZAR1Q86SH2 424 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 DTX1Q86Y01 620 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 OSBPL7Q9BZF2 842 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 ZFYVE1Q9HBF4 777 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
TRAV40-201ENST00000390467 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.46□□□□□ -1.38
TRAV40-201ENST00000390467 FAM170BA6NMN3 283 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.38
TRAV40-201ENST00000390467 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
TRAV40-201ENST00000390467 GRIK1P39086 918 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 ASPAP45381 313 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 SEZ6L2Q6UXD5 910 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 PSMG3-AS1Q96PY0 264 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 OSBPL1AQ9BXW6 950 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 TMEM39AQ9NV64 488 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 CRIM1Q9NZV1 1036 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 AKAP2Q9Y2D5 859 aa6.46□□□□□ -1.38
TRAV40-201ENST00000390467 FBXO24O75426 580 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 MSMPQ1L6U9 139 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 ZSCAN29Q8IWY8 852 aaPredicted RBP6.45□□□□□ -1.38
TRAV40-201ENST00000390467 FBF1Q8TES7 1133 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 LGR6Q9HBX8 967 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 C1GALT1Q9NS00 363 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 LEMD3Q9Y2U8 911 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 OAS3Q9Y6K5 1087 aaKnown RBP6.45□□□□□ -1.38
TRAV40-201ENST00000390467 SYNGAP1Q96PV0 1343 aa6.45□□□□□ -1.38
TRAV40-201ENST00000390467 FOSL1P15407 271 aa6.44□□□□□ -1.38
TRAV40-201ENST00000390467 PPP2R3AQ06190 1150 aa6.44□□□□□ -1.38
TRAV40-201ENST00000390467 KIF4BQ2VIQ3 1234 aa6.44□□□□□ -1.38
TRAV40-201ENST00000390467 NECAB3Q96P71 396 aaPredicted RBP6.44□□□□□ -1.38
TRAV40-201ENST00000390467 FANCD2OSQ96PS1 177 aa6.44□□□□□ -1.38
TRAV40-201ENST00000390467 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
TRAV40-201ENST00000390467 ENC1O14682 589 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 PAGE1O75459 146 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 GSTT1P30711 240 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 GP2P55259 537 aaKnown RBP6.43□□□□□ -1.38
TRAV40-201ENST00000390467 ID3Q02535 119 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 MAP7Q14244 749 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 RASIP1Q5U651 963 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 MPRIPQ6WCQ1 1025 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 KCNB2Q92953 911 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 DISC1Q9NRI5 854 aa6.43□□□□□ -1.38
TRAV40-201ENST00000390467 NME2P22392 152 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 ZNF252P-AS1Q0IIN9 211 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 CDK5R2Q13319 367 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 CPSF6Q16630 551 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRAV40-201ENST00000390467 ALG1LQ6GMV1 187 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 GIMAP7Q8NHV1 300 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
TRAV40-201ENST00000390467 PPP4R2Q9NY27 417 aa6.42□□□□□ -1.38
TRAV40-201ENST00000390467 NEFMP07197 916 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 ARNTP27540 789 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 TTLL4Q14679 1199 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 MAP1SQ66K74 1059 aaPredicted RBP6.41□□□□□ -1.38
TRAV40-201ENST00000390467 GRIN3AQ8TCU5 1115 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 GPBAR1Q8TDU6 330 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 ATXN3LQ9H3M9 355 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 RNF19AQ9NV58 838 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 CACNA2D2Q9NY47 1150 aa6.41□□□□□ -1.38
TRAV40-201ENST00000390467 CYP26A1O43174 497 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 LDHBP07195 334 aaKnown RBP6.4□□□□□ -1.38
TRAV40-201ENST00000390467 CELA3AP09093 270 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 HCLS1P14317 486 aaPredicted RBP6.4□□□□□ -1.38
TRAV40-201ENST00000390467 ATP2B2Q01814 1243 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 MCTP1Q6DN14 999 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 C12orf49Q9H741 205 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 PIDD1Q9HB75 910 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 PPM1HQ9ULR3 514 aa6.4□□□□□ -1.38
TRAV40-201ENST00000390467 PRNPP04156 253 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 USP17L7P0C7H9 530 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 BMP6P22004 513 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 ZC3H12AQ5D1E8 599 aaKnown RBP6.39□□□□□ -1.39
TRAV40-201ENST00000390467 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
TRAV40-201ENST00000390467 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 SRCIN1Q9C0H9 1055 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 CBX8Q9HC52 389 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 U3KQE9 123 aa6.39□□□□□ -1.39
TRAV40-201ENST00000390467 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
TRAV40-201ENST00000390467 WNT11O96014 354 aa6.38□□□□□ -1.39
TRAV40-201ENST00000390467 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms