RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 HOOK1Q9UJC3 728 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 CRB1P82279 1406 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 NPHP4O75161 1426 aaPredicted RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 AKR1B15C9JRZ8 316 aaPredicted RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 NFE2L3Q9Y4A8 694 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 NPATQ14207 1427 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 CHUKO15111 745 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 SARNPP82979 210 aaKnown RBP21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 RAD9BQ6WBX8 426 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 PRPF38AQ8NAV1 312 aaKnown RBP21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 C9orf78Q9NZ63 289 aaPredicted RBP21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 NCKAP5LQ9HCH0 1330 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 ARHGEF10O15013 1369 aa21.6■■□□□ 1.05
SMARCD1-201ENST00000381513 ZKSCAN4Q969J2 545 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 NEDD4P46934 1319 aa21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 WHAMMP3Q1A5X7 153 aa21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 C8orf76Q96K31 380 aa21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 TLR7Q9NYK1 1049 aaKnown RBP21.59■■□□□ 1.05
SMARCD1-201ENST00000381513 ATP7AQ04656 1500 aa21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 CYP21A2P08686 494 aa21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 TBX2Q13207 712 aaPredicted RBP21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 G3BP1Q13283 466 aaKnown RBP eCLIP21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 LONRF3Q496Y0 759 aa21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 EAF2Q96CJ1 260 aaPredicted RBP21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 VIPAS39Q9H9C1 493 aa21.58■■□□□ 1.05
SMARCD1-201ENST00000381513 GOLGA6BA6NDN3 693 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 AARSP49588 968 aaKnown RBP eCLIP21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 CDR1P51861 262 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 PPFIA1Q13136 1202 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 TUBB2AQ13885 445 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 TUBB2BQ9BVA1 445 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 GJB4Q9NTQ9 266 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 NDUFB9Q9Y6M9 179 aa21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.04
SMARCD1-201ENST00000381513 MAP2K1Q02750 393 aaPredicted RBP21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 ACRBPQ8NEB7 543 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 COG1Q8WTW3 980 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 C19orf44Q9H6X5 657 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 ZEB2O60315 1214 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 ANXA1P04083 346 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 SSBP05455 408 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 YEATS4O95619 227 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 STAG1Q8WVM7 1258 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 CAPZA3Q96KX2 299 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 MYO6Q9UM54 1294 aa21.57■■□□□ 1.04
SMARCD1-201ENST00000381513 CMA1P23946 247 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 CLNS1AP54105 237 aaKnown RBP21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 PDE4BQ07343 736 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 MYSM1Q5VVJ2 828 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 IQCA1Q86XH1 822 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 RAB11FIP4Q86YS3 637 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 KIRREL3Q8IZU9 778 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 EIF3HO15372 352 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 ALDH1L1O75891 902 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 CHGBP05060 677 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 PCDHA5Q9Y5H7 936 aa21.56■■□□□ 1.04
SMARCD1-201ENST00000381513 C21orf2O43822 256 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 ABL1P00519 1130 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 CEP85LQ5SZL2 805 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 ARHGEF25Q86VW2 580 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 ANO1Q5XXA6 986 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 B4GALNT4Q76KP1 1039 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 DHX32Q7L7V1 743 aaKnown RBP21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 WDR93Q6P2C0 686 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 MCM8Q9UJA3 840 aa21.55■■□□□ 1.04
SMARCD1-201ENST00000381513 TEX11Q8IYF3 940 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 TACO1Q9BSH4 297 aaKnown RBP21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 TRIM6Q9C030 488 aaPredicted RBP21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 POLD4Q9HCU8 107 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 PREX1Q8TCU6 1659 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 MROH7-TTC4A0A0A0MT08 1334 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 ENC1O14682 589 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 SHOX2O60902 331 aaPredicted RBP21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 GCFC2P16383 781 aaKnown RBP21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 CDC27P30260 824 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 FMNL3Q8IVF7 1028 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 POLR3EQ9NVU0 708 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 TUBE1Q9UJT0 475 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 CARMIL3Q8ND23 1372 aa21.54■■□□□ 1.04
SMARCD1-201ENST00000381513 MCM3P25205 808 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 RBL2Q08999 1139 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 ANKRD18AQ8IVF6 992 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 PPLO60437 1756 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 PDCLQ13371 301 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 NAA25Q14CX7 972 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 CAGE1Q8TC20 777 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 SAMSN1Q9NSI8 373 aaKnown RBP21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 TMED8Q6PL24 325 aaPredicted RBP21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 FAXDC2Q96IV6 333 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms