RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 KRT17Q04695 432 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 TXNDC2Q86VQ3 553 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 UNKQ9C0B0 810 aaKnown RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 ASCC2Q9H1I8 757 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PRR23D1E9PI22 279 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PRR23D2P0DMB1 279 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 GET4Q7L5D6 327 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 UBL4BQ8N7F7 174 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 CNDP1Q96KN2 507 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 OLFM1Q99784 485 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PARVBQ9HBI1 364 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 GOLGA8SH3BPF8 625 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 TRAK2O60296 914 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 HSPA1LP34931 641 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 KRT80Q6KB66 452 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 RSBN1LQ6PCB5 846 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 SMAP1Q8IYB5 467 aaPredicted RBP5.34□□□□□ -1.55
PTCD2-202ENST00000380639 CCDC74AQ96AQ1 378 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 SLC8A3P57103 927 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 PDXDC1Q6P996 788 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 TRIM69Q86WT6 500 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 TP53INP1Q96A56 240 aa5.34□□□□□ -1.55
PTCD2-202ENST00000380639 ZBTB39O15060 712 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 FRAT2O75474 233 aaPredicted RBP5.34□□□□□ -1.56
PTCD2-202ENST00000380639 DAB1O75553 588 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 SFPQP23246 707 aaKnown RBP eCLIP5.34□□□□□ -1.56
PTCD2-202ENST00000380639 TBRG1Q3YBR2 411 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 BBS1Q8NFJ9 593 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 LBHD1Q9BQE6 289 aaPredicted RBP5.34□□□□□ -1.56
PTCD2-202ENST00000380639 USF2Q15853 346 aaPredicted RBP5.34□□□□□ -1.56
PTCD2-202ENST00000380639 OLFML1Q6UWY5 402 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 BIRC5O15392 142 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 SPATA1Q5VX52 437 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC186Q7Z3E2 898 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 COLGALT2Q8IYK4 626 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 KIFC2Q96AC6 838 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 FAM129BQ96TA1 746 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 POLR3CQ9BUI4 534 aaPredicted RBP5.34□□□□□ -1.56
PTCD2-202ENST00000380639 IL1RAPL2Q9NP60 686 aa5.34□□□□□ -1.56
PTCD2-202ENST00000380639 MCF2P10911 925 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 PPIDQ08752 370 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 HS1BP3Q53T59 392 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 AEBP2Q6ZN18 517 aaPredicted RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 RILPL2Q969X0 211 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 DONSONQ9NYP3 566 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 SEPT3Q9UH03 358 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 FBXL5Q9UKA1 691 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 MCF2LO15068 1137 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 TRPC1P48995 793 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 IRX1P78414 480 aaPredicted RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 ZNF229Q9UJW7 825 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 GIT1Q9Y2X7 761 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 GOLGA8JA6NMD2 632 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 GOLGA8KD6RF30 607 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 HAUS5O94927 633 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 KRT1P04264 644 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 CCT6AP40227 531 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 TMTC2Q8N394 836 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 ARMC2Q8NEN0 867 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 NRBF2Q96F24 287 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 ARHGEF3Q9NR81 526 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 HLA-DPA1P20036 260 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 S100A1P23297 94 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 PPFIA1Q13136 1202 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC85BQ15834 202 aaPredicted RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 SDE2Q6IQ49 451 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 EXOC8Q8IYI6 725 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 STXBP3O00186 592 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 THAP12O43422 761 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 AKR1D1P51857 326 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 OCA2Q04671 838 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 CETN1Q12798 172 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC14Q49A88 953 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 AFAP1L2Q8N4X5 818 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 ATP6V0A4Q9HBG4 840 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 GNB5O14775 395 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 EEF1GP26641 437 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 TMOD1P28289 359 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 KRT2P35908 639 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 BZW1Q7L1Q6 419 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 PYGLP06737 847 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 EXOC3L4Q17RC7 722 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 HP1BP3Q5SSJ5 553 aaPredicted RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 FYB2Q5VWT5 728 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC124Q96CT7 223 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 RABL2BQ9UNT1 228 aa5.33□□□□□ -1.56
PTCD2-202ENST00000380639 EIF3AQ14152 1382 aaKnown RBP5.33□□□□□ -1.56
PTCD2-202ENST00000380639 XPOTO43592 962 aaKnown RBP5.32□□□□□ -1.56
PTCD2-202ENST00000380639 GUCY1B2O75343 617 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 KLHL18O94889 574 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 RECQLP46063 649 aaPredicted RBP5.32□□□□□ -1.56
PTCD2-202ENST00000380639 NECAB1Q8N987 351 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 CCNCP24863 283 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 RCN2Q14257 317 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 RAD21L1Q9H4I0 556 aa5.32□□□□□ -1.56
PTCD2-202ENST00000380639 MTMR7Q9Y216 660 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms