RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PHACTR1Q9C0D0 580 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 FYB1O15117 783 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 HMOX1P09601 288 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPRA-204ENST00000380393 SMTNP53814 917 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 DZIP3Q86Y13 1208 aaKnown RBP10.65□□□□□ -0.7
PTPRA-204ENST00000380393 OSBPL9Q96SU4 736 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 SLC39A2Q9NP94 309 aa10.65□□□□□ -0.7
PTPRA-204ENST00000380393 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.71
PTPRA-204ENST00000380393 SYT1P21579 422 aa10.65□□□□□ -0.71
PTPRA-204ENST00000380393 PAPOLAP51003 745 aaKnown RBP10.65□□□□□ -0.71
PTPRA-204ENST00000380393 INF2Q27J81 1249 aa10.65□□□□□ -0.71
PTPRA-204ENST00000380393 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.71
PTPRA-204ENST00000380393 ACEP12821 1306 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 STX6O43752 255 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 FESP07332 822 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 ARHGAP25P42331 645 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 TTC22Q5TAA0 569 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 PHC3Q8NDX5 983 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 ARPC5LQ9BPX5 153 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 KAT14Q9H8E8 782 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 ANO2Q9NQ90 1003 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 DACT1Q9NYF0 836 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 NUB1Q9Y5A7 615 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 TECPR2O15040 1411 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 FANCGO15287 622 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 TRIM65Q6PJ69 517 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 GBP3Q9H0R5 595 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 GOLGA6L4A6NEF3 574 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 IRAK1P51617 712 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 HDGFL2Q7Z4V5 671 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-204ENST00000380393 NGDNQ8NEJ9 315 aaKnown RBP10.64□□□□□ -0.71
PTPRA-204ENST00000380393 RILPL2Q969X0 211 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 MTRQ99707 1265 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 CD163L1Q9NR16 1453 aa10.64□□□□□ -0.71
PTPRA-204ENST00000380393 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-204ENST00000380393 FAM135BQ49AJ0 1406 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 MEFVO15553 781 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-204ENST00000380393 SLC4A2P04920 1241 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 RNF187Q5TA31 235 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-204ENST00000380393 B4GALNT4Q76KP1 1039 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 TMC6Q7Z403 805 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 CCDC50Q8IVM0 306 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 CCDC150Q8NCX0 1101 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 ZCWPW1Q9H0M4 648 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 EHD4Q9H223 541 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 SLC40A1Q9NP59 571 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 MIS18BP1Q6P0N0 1132 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 MICALCLQ6ZW33 695 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 PARP9Q8IXQ6 854 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 IGSF22Q8N9C0 903 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 PAPOLBQ9NRJ5 636 aaKnown RBP10.63□□□□□ -0.71
PTPRA-204ENST00000380393 SLC8A1P32418 973 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 EXOC8Q8IYI6 725 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
PTPRA-204ENST00000380393 FOXO3O43524 673 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 RASSF9O75901 435 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 GNPTABQ3T906 1256 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 KCNV2Q8TDN2 545 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 ALS2CR12Q96Q35 445 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 DLC1Q96QB1 1528 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 GNG11P61952 73 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 ROR2Q01974 943 aaKnown RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 TAX1BP1Q86VP1 789 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 BZW1Q7L1Q6 419 aaKnown RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 GET4Q7L5D6 327 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 FAM76AQ8TAV0 307 aa10.62□□□□□ -0.71
PTPRA-204ENST00000380393 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 OSBPL5Q9H0X9 879 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-204ENST00000380393 CDHR2Q9BYE9 1310 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 MSH6P52701 1360 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 NDUFAB1O14561 156 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 ZSCAN12O43309 604 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 OPA1O60313 960 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 WDHD1O75717 1129 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-204ENST00000380393 GNAT1P11488 350 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 MPP3Q13368 585 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 TRIM58Q8NG06 486 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 SPAG5Q96R06 1193 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 PNKPQ96T60 521 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 VCPKMTQ9H867 229 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 TRPC6Q9Y210 931 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 CPS1P31327 1500 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 GOLGA6L10A6NI86 522 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 RNF8O76064 485 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 SASH1O94885 1247 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 ZNF24P17028 368 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 USP5P45974 858 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms